Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
SCAMP4Q969E2 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.7■□□□□ 0.9
SCAMP4Q969E2 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCAMP4Q969E2 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCAMP4Q969E2 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.7■□□□□ 0.9
SCAMP4Q969E2 AC091799.1-201ENST00000422823 811 ntBASIC20.7■□□□□ 0.9
SCAMP4Q969E2 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.7■□□□□ 0.9
SCAMP4Q969E2 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.7■□□□□ 0.9
SCAMP4Q969E2 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCAMP4Q969E2 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.7■□□□□ 0.9
SCAMP4Q969E2 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.7■□□□□ 0.9
SCAMP4Q969E2 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCAMP4Q969E2 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SCAMP4Q969E2 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SCAMP4Q969E2 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.69■□□□□ 0.9
SCAMP4Q969E2 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.69■□□□□ 0.9
SCAMP4Q969E2 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCAMP4Q969E2 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCAMP4Q969E2 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCAMP4Q969E2 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SCAMP4Q969E2 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCAMP4Q969E2 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.69■□□□□ 0.9
SCAMP4Q969E2 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.69■□□□□ 0.9
SCAMP4Q969E2 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SCAMP4Q969E2 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCAMP4Q969E2 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCAMP4Q969E2 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCAMP4Q969E2 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCAMP4Q969E2 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SCAMP4Q969E2 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SCAMP4Q969E2 AC026310.3-201ENST00000625186 2373 ntBASIC20.68■□□□□ 0.9
SCAMP4Q969E2 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SCAMP4Q969E2 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SCAMP4Q969E2 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCAMP4Q969E2 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCAMP4Q969E2 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCAMP4Q969E2 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.68■□□□□ 0.9
SCAMP4Q969E2 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SCAMP4Q969E2 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.68■□□□□ 0.9
SCAMP4Q969E2 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SCAMP4Q969E2 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCAMP4Q969E2 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCAMP4Q969E2 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SCAMP4Q969E2 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCAMP4Q969E2 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCAMP4Q969E2 AF106564.1-201ENST00000607058 2553 ntBASIC20.67■□□□□ 0.9
SCAMP4Q969E2 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SCAMP4Q969E2 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.67■□□□□ 0.9
SCAMP4Q969E2 CYP2T1P-201ENST00000432607 1285 ntBASIC20.67■□□□□ 0.9
SCAMP4Q969E2 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SCAMP4Q969E2 AL591742.1-201ENST00000604433 565 ntBASIC20.67■□□□□ 0.9
SCAMP4Q969E2 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.67■□□□□ 0.9
SCAMP4Q969E2 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.67■□□□□ 0.9
SCAMP4Q969E2 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SCAMP4Q969E2 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SCAMP4Q969E2 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SCAMP4Q969E2 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCAMP4Q969E2 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCAMP4Q969E2 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.66■□□□□ 0.9
SCAMP4Q969E2 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCAMP4Q969E2 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.66■□□□□ 0.9
SCAMP4Q969E2 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCAMP4Q969E2 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
SCAMP4Q969E2 NCF1B-203ENST00000435988 1254 ntBASIC20.66■□□□□ 0.9
SCAMP4Q969E2 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.66■□□□□ 0.9
SCAMP4Q969E2 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.66■□□□□ 0.9
SCAMP4Q969E2 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.66■□□□□ 0.9
SCAMP4Q969E2 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SCAMP4Q969E2 AC016405.3-201ENST00000607710 860 ntBASIC20.66■□□□□ 0.9
SCAMP4Q969E2 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.66■□□□□ 0.9
SCAMP4Q969E2 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.66■□□□□ 0.9
SCAMP4Q969E2 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCAMP4Q969E2 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCAMP4Q969E2 FEM1AP4-201ENST00000443167 1987 ntBASIC20.66■□□□□ 0.9
SCAMP4Q969E2 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SCAMP4Q969E2 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.65■□□□□ 0.9
SCAMP4Q969E2 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCAMP4Q969E2 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.65■□□□□ 0.9
SCAMP4Q969E2 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.65■□□□□ 0.9
SCAMP4Q969E2 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.65■□□□□ 0.9
SCAMP4Q969E2 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SCAMP4Q969E2 ID1-201ENST00000376105 1233 ntBASIC20.65■□□□□ 0.9
SCAMP4Q969E2 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SCAMP4Q969E2 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.65■□□□□ 0.9
SCAMP4Q969E2 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.65■□□□□ 0.9
SCAMP4Q969E2 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SCAMP4Q969E2 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.65■□□□□ 0.9
SCAMP4Q969E2 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCAMP4Q969E2 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.65■□□□□ 0.9
SCAMP4Q969E2 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SCAMP4Q969E2 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SCAMP4Q969E2 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.64■□□□□ 0.9
SCAMP4Q969E2 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.64■□□□□ 0.89
SCAMP4Q969E2 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SCAMP4Q969E2 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCAMP4Q969E2 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCAMP4Q969E2 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCAMP4Q969E2 HLA-L-209ENST00000420110 1011 ntBASIC20.64■□□□□ 0.89
SCAMP4Q969E2 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.64■□□□□ 0.89
SCAMP4Q969E2 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms