Protein–RNA interactions for Protein: Q92772

CDKL2, Cyclin-dependent kinase-like 2, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL2Q92772 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDKL2Q92772 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDKL2Q92772 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.95■□□□□ 0.94
CDKL2Q92772 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDKL2Q92772 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDKL2Q92772 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDKL2Q92772 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDKL2Q92772 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.95■□□□□ 0.94
CDKL2Q92772 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.94■□□□□ 0.94
CDKL2Q92772 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDKL2Q92772 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDKL2Q92772 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.94■□□□□ 0.94
CDKL2Q92772 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDKL2Q92772 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.94■□□□□ 0.94
CDKL2Q92772 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDKL2Q92772 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CDKL2Q92772 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.94■□□□□ 0.94
CDKL2Q92772 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.94■□□□□ 0.94
CDKL2Q92772 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDKL2Q92772 AC096631.2-201ENST00000436136 790 ntBASIC20.94■□□□□ 0.94
CDKL2Q92772 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.94■□□□□ 0.94
CDKL2Q92772 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.94■□□□□ 0.94
CDKL2Q92772 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.94■□□□□ 0.94
CDKL2Q92772 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.94■□□□□ 0.94
CDKL2Q92772 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.94■□□□□ 0.94
CDKL2Q92772 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDKL2Q92772 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDKL2Q92772 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDKL2Q92772 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CDKL2Q92772 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDKL2Q92772 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDKL2Q92772 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDKL2Q92772 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDKL2Q92772 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDKL2Q92772 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDKL2Q92772 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDKL2Q92772 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.93■□□□□ 0.94
CDKL2Q92772 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.93■□□□□ 0.94
CDKL2Q92772 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDKL2Q92772 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
CDKL2Q92772 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDKL2Q92772 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDKL2Q92772 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CDKL2Q92772 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDKL2Q92772 EDA-201ENST00000338901 1233 ntBASIC20.93■□□□□ 0.94
CDKL2Q92772 MIR572-201ENST00000384983 95 ntBASIC20.93■□□□□ 0.94
CDKL2Q92772 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.93■□□□□ 0.94
CDKL2Q92772 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.93■□□□□ 0.94
CDKL2Q92772 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.93■□□□□ 0.94
CDKL2Q92772 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.93■□□□□ 0.94
CDKL2Q92772 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.93■□□□□ 0.94
CDKL2Q92772 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDKL2Q92772 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDKL2Q92772 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDKL2Q92772 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CDKL2Q92772 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDKL2Q92772 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.92■□□□□ 0.94
CDKL2Q92772 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDKL2Q92772 AP005212.1-201ENST00000581547 1997 ntBASIC20.92■□□□□ 0.94
CDKL2Q92772 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CDKL2Q92772 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
CDKL2Q92772 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
CDKL2Q92772 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.92■□□□□ 0.94
CDKL2Q92772 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDKL2Q92772 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.92■□□□□ 0.94
CDKL2Q92772 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDKL2Q92772 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.92■□□□□ 0.94
CDKL2Q92772 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.92■□□□□ 0.94
CDKL2Q92772 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.92■□□□□ 0.94
CDKL2Q92772 AC106739.1-201ENST00000617035 715 ntBASIC20.92■□□□□ 0.94
CDKL2Q92772 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.92■□□□□ 0.94
CDKL2Q92772 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CDKL2Q92772 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDKL2Q92772 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDKL2Q92772 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDKL2Q92772 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDKL2Q92772 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDKL2Q92772 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDKL2Q92772 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.91■□□□□ 0.94
CDKL2Q92772 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.91■□□□□ 0.94
CDKL2Q92772 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.91■□□□□ 0.94
CDKL2Q92772 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CDKL2Q92772 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDKL2Q92772 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.91■□□□□ 0.94
CDKL2Q92772 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDKL2Q92772 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDKL2Q92772 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CDKL2Q92772 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDKL2Q92772 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDKL2Q92772 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CDKL2Q92772 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDKL2Q92772 RASA4CP-201ENST00000424092 1398 ntBASIC20.9■□□□□ 0.94
CDKL2Q92772 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDKL2Q92772 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDKL2Q92772 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.9■□□□□ 0.94
CDKL2Q92772 AP001330.3-201ENST00000520123 633 ntBASIC20.9■□□□□ 0.94
CDKL2Q92772 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.9■□□□□ 0.94
CDKL2Q92772 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
CDKL2Q92772 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDKL2Q92772 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms