Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC27.41■■□□□ 1.98
RAPGEF4Q8WZA2 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC27.41■■□□□ 1.98
RAPGEF4Q8WZA2 KRT17P3-201ENST00000420566 1262 ntBASIC27.41■■□□□ 1.98
RAPGEF4Q8WZA2 HES2-205ENST00000487437 968 ntTSL 3 BASIC27.41■■□□□ 1.98
RAPGEF4Q8WZA2 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC27.41■■□□□ 1.98
RAPGEF4Q8WZA2 RNF121-214ENST00000533380 870 ntTSL 3 BASIC27.41■■□□□ 1.98
RAPGEF4Q8WZA2 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC27.41■■□□□ 1.98
RAPGEF4Q8WZA2 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
RAPGEF4Q8WZA2 NXN-202ENST00000537628 1340 ntTSL 3 BASIC27.41■■□□□ 1.98
RAPGEF4Q8WZA2 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC27.4■■□□□ 1.98
RAPGEF4Q8WZA2 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC27.4■■□□□ 1.98
RAPGEF4Q8WZA2 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC27.4■■□□□ 1.98
RAPGEF4Q8WZA2 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
RAPGEF4Q8WZA2 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC27.4■■□□□ 1.98
RAPGEF4Q8WZA2 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
RAPGEF4Q8WZA2 RPPH1-201ENST00000516869 333 ntBASIC27.4■■□□□ 1.98
RAPGEF4Q8WZA2 C1QBPP2-201ENST00000528754 825 ntBASIC27.4■■□□□ 1.98
RAPGEF4Q8WZA2 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
RAPGEF4Q8WZA2 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
RAPGEF4Q8WZA2 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC27.4■■□□□ 1.98
RAPGEF4Q8WZA2 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC27.4■■□□□ 1.98
RAPGEF4Q8WZA2 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
RAPGEF4Q8WZA2 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
RAPGEF4Q8WZA2 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
RAPGEF4Q8WZA2 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
RAPGEF4Q8WZA2 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
RAPGEF4Q8WZA2 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
RAPGEF4Q8WZA2 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC27.39■■□□□ 1.98
RAPGEF4Q8WZA2 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC27.39■■□□□ 1.98
RAPGEF4Q8WZA2 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC27.39■■□□□ 1.98
RAPGEF4Q8WZA2 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
RAPGEF4Q8WZA2 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC27.39■■□□□ 1.98
RAPGEF4Q8WZA2 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC27.39■■□□□ 1.98
RAPGEF4Q8WZA2 OR2A1-AS1-207ENST00000486094 819 ntBASIC27.39■■□□□ 1.98
RAPGEF4Q8WZA2 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC27.39■■□□□ 1.98
RAPGEF4Q8WZA2 FAM197Y4-202ENST00000622692 608 ntBASIC27.39■■□□□ 1.98
RAPGEF4Q8WZA2 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC27.39■■□□□ 1.98
RAPGEF4Q8WZA2 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
RAPGEF4Q8WZA2 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC27.39■■□□□ 1.97
RAPGEF4Q8WZA2 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC27.39■■□□□ 1.97
RAPGEF4Q8WZA2 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
RAPGEF4Q8WZA2 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
RAPGEF4Q8WZA2 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC27.38■■□□□ 1.97
RAPGEF4Q8WZA2 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC27.38■■□□□ 1.97
RAPGEF4Q8WZA2 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
RAPGEF4Q8WZA2 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
RAPGEF4Q8WZA2 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
RAPGEF4Q8WZA2 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC27.38■■□□□ 1.97
RAPGEF4Q8WZA2 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
RAPGEF4Q8WZA2 SOX15-203ENST00000570788 1093 ntBASIC27.38■■□□□ 1.97
RAPGEF4Q8WZA2 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC27.38■■□□□ 1.97
RAPGEF4Q8WZA2 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC27.38■■□□□ 1.97
RAPGEF4Q8WZA2 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC27.38■■□□□ 1.97
RAPGEF4Q8WZA2 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC27.38■■□□□ 1.97
RAPGEF4Q8WZA2 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC27.37■■□□□ 1.97
RAPGEF4Q8WZA2 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
RAPGEF4Q8WZA2 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC27.37■■□□□ 1.97
RAPGEF4Q8WZA2 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
RAPGEF4Q8WZA2 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
RAPGEF4Q8WZA2 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
RAPGEF4Q8WZA2 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC27.37■■□□□ 1.97
RAPGEF4Q8WZA2 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC27.37■■□□□ 1.97
RAPGEF4Q8WZA2 SLC29A4P2-201ENST00000504749 1089 ntBASIC27.37■■□□□ 1.97
RAPGEF4Q8WZA2 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
RAPGEF4Q8WZA2 REXO2-208ENST00000539754 791 ntTSL 2 BASIC27.37■■□□□ 1.97
RAPGEF4Q8WZA2 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC27.37■■□□□ 1.97
RAPGEF4Q8WZA2 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC27.37■■□□□ 1.97
RAPGEF4Q8WZA2 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
RAPGEF4Q8WZA2 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC27.37■■□□□ 1.97
RAPGEF4Q8WZA2 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC27.37■■□□□ 1.97
RAPGEF4Q8WZA2 C9orf163-202ENST00000624034 2573 ntBASIC27.37■■□□□ 1.97
RAPGEF4Q8WZA2 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
RAPGEF4Q8WZA2 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC27.36■■□□□ 1.97
RAPGEF4Q8WZA2 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
RAPGEF4Q8WZA2 CRK-204ENST00000574295 1391 ntTSL 5 BASIC27.36■■□□□ 1.97
RAPGEF4Q8WZA2 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
RAPGEF4Q8WZA2 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
RAPGEF4Q8WZA2 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
RAPGEF4Q8WZA2 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
RAPGEF4Q8WZA2 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC27.36■■□□□ 1.97
RAPGEF4Q8WZA2 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
RAPGEF4Q8WZA2 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC27.36■■□□□ 1.97
RAPGEF4Q8WZA2 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
RAPGEF4Q8WZA2 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC27.36■■□□□ 1.97
RAPGEF4Q8WZA2 RN7SL471P-201ENST00000580476 299 ntBASIC27.36■■□□□ 1.97
RAPGEF4Q8WZA2 AC105020.6-201ENST00000621523 1217 ntBASIC27.36■■□□□ 1.97
RAPGEF4Q8WZA2 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
RAPGEF4Q8WZA2 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
RAPGEF4Q8WZA2 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
RAPGEF4Q8WZA2 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC27.36■■□□□ 1.97
RAPGEF4Q8WZA2 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
RAPGEF4Q8WZA2 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC27.35■■□□□ 1.97
RAPGEF4Q8WZA2 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
RAPGEF4Q8WZA2 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC27.35■■□□□ 1.97
RAPGEF4Q8WZA2 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
RAPGEF4Q8WZA2 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
RAPGEF4Q8WZA2 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
RAPGEF4Q8WZA2 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC27.35■■□□□ 1.97
RAPGEF4Q8WZA2 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
RAPGEF4Q8WZA2 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC27.35■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms