Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 AC010997.5-201ENST00000609182 354 ntBASIC20.65■□□□□ 0.9
CKAP2Q8WWK9 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CKAP2Q8WWK9 AC116562.4-201ENST00000641316 2276 ntBASIC20.65■□□□□ 0.9
CKAP2Q8WWK9 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CKAP2Q8WWK9 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.65■□□□□ 0.9
CKAP2Q8WWK9 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CKAP2Q8WWK9 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CKAP2Q8WWK9 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.64■□□□□ 0.9
CKAP2Q8WWK9 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CKAP2Q8WWK9 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
CKAP2Q8WWK9 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CKAP2Q8WWK9 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CKAP2Q8WWK9 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
CKAP2Q8WWK9 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.64■□□□□ 0.89
CKAP2Q8WWK9 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.64■□□□□ 0.89
CKAP2Q8WWK9 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.64■□□□□ 0.89
CKAP2Q8WWK9 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.64■□□□□ 0.89
CKAP2Q8WWK9 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CKAP2Q8WWK9 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CKAP2Q8WWK9 AC098818.2-201ENST00000564925 2320 ntBASIC20.64■□□□□ 0.89
CKAP2Q8WWK9 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.64■□□□□ 0.89
CKAP2Q8WWK9 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CKAP2Q8WWK9 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CKAP2Q8WWK9 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CKAP2Q8WWK9 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CKAP2Q8WWK9 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CKAP2Q8WWK9 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CKAP2Q8WWK9 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CKAP2Q8WWK9 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CKAP2Q8WWK9 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.63■□□□□ 0.89
CKAP2Q8WWK9 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CKAP2Q8WWK9 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.63■□□□□ 0.89
CKAP2Q8WWK9 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CKAP2Q8WWK9 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.63■□□□□ 0.89
CKAP2Q8WWK9 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CKAP2Q8WWK9 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CKAP2Q8WWK9 TCF3P1-201ENST00000423021 1937 ntBASIC20.63■□□□□ 0.89
CKAP2Q8WWK9 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.62■□□□□ 0.89
CKAP2Q8WWK9 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CKAP2Q8WWK9 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.62■□□□□ 0.89
CKAP2Q8WWK9 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CKAP2Q8WWK9 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CKAP2Q8WWK9 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CKAP2Q8WWK9 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CKAP2Q8WWK9 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CKAP2Q8WWK9 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.62■□□□□ 0.89
CKAP2Q8WWK9 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
CKAP2Q8WWK9 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CKAP2Q8WWK9 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.62■□□□□ 0.89
CKAP2Q8WWK9 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CKAP2Q8WWK9 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.62■□□□□ 0.89
CKAP2Q8WWK9 AC010525.1-201ENST00000585559 441 ntBASIC20.62■□□□□ 0.89
CKAP2Q8WWK9 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CKAP2Q8WWK9 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CKAP2Q8WWK9 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CKAP2Q8WWK9 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CKAP2Q8WWK9 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CKAP2Q8WWK9 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CKAP2Q8WWK9 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CKAP2Q8WWK9 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
CKAP2Q8WWK9 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CKAP2Q8WWK9 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.62■□□□□ 0.89
CKAP2Q8WWK9 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CKAP2Q8WWK9 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CKAP2Q8WWK9 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CKAP2Q8WWK9 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CKAP2Q8WWK9 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CKAP2Q8WWK9 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
CKAP2Q8WWK9 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.61■□□□□ 0.89
CKAP2Q8WWK9 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CKAP2Q8WWK9 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CKAP2Q8WWK9 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CKAP2Q8WWK9 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CKAP2Q8WWK9 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
CKAP2Q8WWK9 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.6■□□□□ 0.89
CKAP2Q8WWK9 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CKAP2Q8WWK9 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CKAP2Q8WWK9 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CKAP2Q8WWK9 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CKAP2Q8WWK9 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CKAP2Q8WWK9 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
CKAP2Q8WWK9 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CKAP2Q8WWK9 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CKAP2Q8WWK9 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.6■□□□□ 0.89
CKAP2Q8WWK9 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CKAP2Q8WWK9 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CKAP2Q8WWK9 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CKAP2Q8WWK9 MIR3181-201ENST00000578512 73 ntBASIC20.6■□□□□ 0.89
CKAP2Q8WWK9 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CKAP2Q8WWK9 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CKAP2Q8WWK9 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
CKAP2Q8WWK9 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CKAP2Q8WWK9 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CKAP2Q8WWK9 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.6■□□□□ 0.89
CKAP2Q8WWK9 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CKAP2Q8WWK9 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CKAP2Q8WWK9 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CKAP2Q8WWK9 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CKAP2Q8WWK9 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CKAP2Q8WWK9 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms