Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SLC44A1Q8WWI5 AC024257.2-201ENST00000549699 147 ntBASIC20.84■□□□□ 0.93
SLC44A1Q8WWI5 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SLC44A1Q8WWI5 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC44A1Q8WWI5 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.84■□□□□ 0.93
SLC44A1Q8WWI5 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.84■□□□□ 0.93
SLC44A1Q8WWI5 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC44A1Q8WWI5 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SLC44A1Q8WWI5 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.84■□□□□ 0.93
SLC44A1Q8WWI5 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SLC44A1Q8WWI5 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SLC44A1Q8WWI5 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC44A1Q8WWI5 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC44A1Q8WWI5 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.83■□□□□ 0.93
SLC44A1Q8WWI5 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SLC44A1Q8WWI5 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC44A1Q8WWI5 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.83■□□□□ 0.93
SLC44A1Q8WWI5 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC44A1Q8WWI5 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
SLC44A1Q8WWI5 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC44A1Q8WWI5 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.83■□□□□ 0.93
SLC44A1Q8WWI5 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
SLC44A1Q8WWI5 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.83■□□□□ 0.93
SLC44A1Q8WWI5 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC44A1Q8WWI5 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLC44A1Q8WWI5 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SLC44A1Q8WWI5 FP700111.2-201ENST00000619190 1892 ntBASIC20.83■□□□□ 0.92
SLC44A1Q8WWI5 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
SLC44A1Q8WWI5 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.83■□□□□ 0.92
SLC44A1Q8WWI5 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.83■□□□□ 0.92
SLC44A1Q8WWI5 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SLC44A1Q8WWI5 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLC44A1Q8WWI5 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLC44A1Q8WWI5 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.82■□□□□ 0.92
SLC44A1Q8WWI5 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC44A1Q8WWI5 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC44A1Q8WWI5 AC105233.4-201ENST00000642045 216 ntBASIC20.82■□□□□ 0.92
SLC44A1Q8WWI5 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.82■□□□□ 0.92
SLC44A1Q8WWI5 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLC44A1Q8WWI5 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.82■□□□□ 0.92
SLC44A1Q8WWI5 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC44A1Q8WWI5 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC44A1Q8WWI5 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.81■□□□□ 0.92
SLC44A1Q8WWI5 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.81■□□□□ 0.92
SLC44A1Q8WWI5 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC44A1Q8WWI5 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC44A1Q8WWI5 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC44A1Q8WWI5 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SLC44A1Q8WWI5 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC44A1Q8WWI5 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC44A1Q8WWI5 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC44A1Q8WWI5 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC44A1Q8WWI5 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLC44A1Q8WWI5 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SLC44A1Q8WWI5 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC44A1Q8WWI5 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLC44A1Q8WWI5 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.81■□□□□ 0.92
SLC44A1Q8WWI5 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.81■□□□□ 0.92
SLC44A1Q8WWI5 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLC44A1Q8WWI5 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.81■□□□□ 0.92
SLC44A1Q8WWI5 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.81■□□□□ 0.92
SLC44A1Q8WWI5 AL136162.1-201ENST00000607711 1078 ntBASIC20.81■□□□□ 0.92
SLC44A1Q8WWI5 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.81■□□□□ 0.92
SLC44A1Q8WWI5 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
SLC44A1Q8WWI5 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC44A1Q8WWI5 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.81■□□□□ 0.92
SLC44A1Q8WWI5 AL512408.1-201ENST00000569378 2000 ntBASIC20.81■□□□□ 0.92
SLC44A1Q8WWI5 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC44A1Q8WWI5 AFG3L1P-217ENST00000557444 2447 ntBASIC20.8■□□□□ 0.92
SLC44A1Q8WWI5 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLC44A1Q8WWI5 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SLC44A1Q8WWI5 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC44A1Q8WWI5 PCDHAC2-203ENST00000615316 3011 ntBASIC20.8■□□□□ 0.92
SLC44A1Q8WWI5 AC011484.1-201ENST00000377652 1995 ntBASIC20.8■□□□□ 0.92
SLC44A1Q8WWI5 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SLC44A1Q8WWI5 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.8■□□□□ 0.92
SLC44A1Q8WWI5 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.8■□□□□ 0.92
SLC44A1Q8WWI5 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.8■□□□□ 0.92
SLC44A1Q8WWI5 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
SLC44A1Q8WWI5 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.8■□□□□ 0.92
SLC44A1Q8WWI5 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.8■□□□□ 0.92
SLC44A1Q8WWI5 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SLC44A1Q8WWI5 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.8■□□□□ 0.92
SLC44A1Q8WWI5 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
SLC44A1Q8WWI5 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
SLC44A1Q8WWI5 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SLC44A1Q8WWI5 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.79■□□□□ 0.92
SLC44A1Q8WWI5 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC44A1Q8WWI5 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SLC44A1Q8WWI5 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.79■□□□□ 0.92
SLC44A1Q8WWI5 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.79■□□□□ 0.92
SLC44A1Q8WWI5 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.79■□□□□ 0.92
SLC44A1Q8WWI5 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SLC44A1Q8WWI5 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC44A1Q8WWI5 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC44A1Q8WWI5 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
SLC44A1Q8WWI5 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SLC44A1Q8WWI5 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.79■□□□□ 0.92
SLC44A1Q8WWI5 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC44A1Q8WWI5 AC135279.3-201ENST00000610945 1311 ntBASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms