Protein–RNA interactions for Protein: Q8WVK7

SKA2, Spindle and kinetochore-associated protein 2, humanhuman

Predicted RBP Predictions only

Length 121 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2Q8WVK7 AC120498.10-201ENST00000621827 505 ntBASIC20.57■□□□□ 0.88
SKA2Q8WVK7 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.57■□□□□ 0.88
SKA2Q8WVK7 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SKA2Q8WVK7 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SKA2Q8WVK7 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SKA2Q8WVK7 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SKA2Q8WVK7 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.57■□□□□ 0.88
SKA2Q8WVK7 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SKA2Q8WVK7 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SKA2Q8WVK7 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SKA2Q8WVK7 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SKA2Q8WVK7 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SKA2Q8WVK7 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SKA2Q8WVK7 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.56■□□□□ 0.88
SKA2Q8WVK7 KRT19P1-201ENST00000405746 1186 ntBASIC20.56■□□□□ 0.88
SKA2Q8WVK7 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SKA2Q8WVK7 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.56■□□□□ 0.88
SKA2Q8WVK7 AC138907.5-202ENST00000569484 235 ntBASIC20.56■□□□□ 0.88
SKA2Q8WVK7 AP001160.3-201ENST00000601484 763 ntBASIC20.56■□□□□ 0.88
SKA2Q8WVK7 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
SKA2Q8WVK7 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.56■□□□□ 0.88
SKA2Q8WVK7 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SKA2Q8WVK7 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SKA2Q8WVK7 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
SKA2Q8WVK7 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SKA2Q8WVK7 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SKA2Q8WVK7 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SKA2Q8WVK7 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SKA2Q8WVK7 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SKA2Q8WVK7 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SKA2Q8WVK7 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SKA2Q8WVK7 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SKA2Q8WVK7 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SKA2Q8WVK7 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
SKA2Q8WVK7 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SKA2Q8WVK7 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SKA2Q8WVK7 POU5F1P4-201ENST00000413175 1085 ntBASIC20.55■□□□□ 0.88
SKA2Q8WVK7 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.55■□□□□ 0.88
SKA2Q8WVK7 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
SKA2Q8WVK7 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
SKA2Q8WVK7 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SKA2Q8WVK7 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.55■□□□□ 0.88
SKA2Q8WVK7 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SKA2Q8WVK7 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SKA2Q8WVK7 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SKA2Q8WVK7 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.54■□□□□ 0.88
SKA2Q8WVK7 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SKA2Q8WVK7 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.54■□□□□ 0.88
SKA2Q8WVK7 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SKA2Q8WVK7 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
SKA2Q8WVK7 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SKA2Q8WVK7 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.54■□□□□ 0.88
SKA2Q8WVK7 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.54■□□□□ 0.88
SKA2Q8WVK7 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SKA2Q8WVK7 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SKA2Q8WVK7 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
SKA2Q8WVK7 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SKA2Q8WVK7 AC010141.2-201ENST00000452426 721 ntBASIC20.54■□□□□ 0.88
SKA2Q8WVK7 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.54■□□□□ 0.88
SKA2Q8WVK7 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SKA2Q8WVK7 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SKA2Q8WVK7 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SKA2Q8WVK7 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SKA2Q8WVK7 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SKA2Q8WVK7 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SKA2Q8WVK7 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.53■□□□□ 0.88
SKA2Q8WVK7 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SKA2Q8WVK7 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SKA2Q8WVK7 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.53■□□□□ 0.88
SKA2Q8WVK7 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.53■□□□□ 0.88
SKA2Q8WVK7 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SKA2Q8WVK7 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.53■□□□□ 0.88
SKA2Q8WVK7 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.53■□□□□ 0.88
SKA2Q8WVK7 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SKA2Q8WVK7 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.53■□□□□ 0.88
SKA2Q8WVK7 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SKA2Q8WVK7 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SKA2Q8WVK7 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SKA2Q8WVK7 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.53■□□□□ 0.88
SKA2Q8WVK7 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SKA2Q8WVK7 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SKA2Q8WVK7 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
SKA2Q8WVK7 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.52■□□□□ 0.88
SKA2Q8WVK7 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SKA2Q8WVK7 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.52■□□□□ 0.88
SKA2Q8WVK7 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
SKA2Q8WVK7 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SKA2Q8WVK7 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SKA2Q8WVK7 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SKA2Q8WVK7 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.52■□□□□ 0.88
SKA2Q8WVK7 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
SKA2Q8WVK7 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.87
SKA2Q8WVK7 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.51■□□□□ 0.87
SKA2Q8WVK7 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
SKA2Q8WVK7 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.51■□□□□ 0.87
SKA2Q8WVK7 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SKA2Q8WVK7 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SKA2Q8WVK7 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SKA2Q8WVK7 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SKA2Q8WVK7 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms