Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.2■□□□□ 0.5
RPS4Y2Q8TD47 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RPS4Y2Q8TD47 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.2■□□□□ 0.5
RPS4Y2Q8TD47 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPS4Y2Q8TD47 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RPS4Y2Q8TD47 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.2■□□□□ 0.5
RPS4Y2Q8TD47 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.2■□□□□ 0.5
RPS4Y2Q8TD47 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.2■□□□□ 0.5
RPS4Y2Q8TD47 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.2■□□□□ 0.5
RPS4Y2Q8TD47 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RPS4Y2Q8TD47 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.19■□□□□ 0.5
RPS4Y2Q8TD47 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RPS4Y2Q8TD47 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RPS4Y2Q8TD47 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.19■□□□□ 0.5
RPS4Y2Q8TD47 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
RPS4Y2Q8TD47 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
RPS4Y2Q8TD47 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RPS4Y2Q8TD47 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
RPS4Y2Q8TD47 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
RPS4Y2Q8TD47 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.19■□□□□ 0.5
RPS4Y2Q8TD47 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RPS4Y2Q8TD47 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.19■□□□□ 0.5
RPS4Y2Q8TD47 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RPS4Y2Q8TD47 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
RPS4Y2Q8TD47 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPS4Y2Q8TD47 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RPS4Y2Q8TD47 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.18■□□□□ 0.5
RPS4Y2Q8TD47 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPS4Y2Q8TD47 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.18■□□□□ 0.5
RPS4Y2Q8TD47 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.18■□□□□ 0.5
RPS4Y2Q8TD47 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
RPS4Y2Q8TD47 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
RPS4Y2Q8TD47 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.18■□□□□ 0.5
RPS4Y2Q8TD47 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.18■□□□□ 0.5
RPS4Y2Q8TD47 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.18■□□□□ 0.5
RPS4Y2Q8TD47 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.18■□□□□ 0.5
RPS4Y2Q8TD47 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.18■□□□□ 0.5
RPS4Y2Q8TD47 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.18■□□□□ 0.5
RPS4Y2Q8TD47 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
RPS4Y2Q8TD47 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
RPS4Y2Q8TD47 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPS4Y2Q8TD47 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.18■□□□□ 0.5
RPS4Y2Q8TD47 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
RPS4Y2Q8TD47 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RPS4Y2Q8TD47 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
RPS4Y2Q8TD47 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RPS4Y2Q8TD47 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
RPS4Y2Q8TD47 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RPS4Y2Q8TD47 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RPS4Y2Q8TD47 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RPS4Y2Q8TD47 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RPS4Y2Q8TD47 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RPS4Y2Q8TD47 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RPS4Y2Q8TD47 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RPS4Y2Q8TD47 AFG3L1P-217ENST00000557444 2447 ntBASIC18.17■□□□□ 0.5
RPS4Y2Q8TD47 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.17■□□□□ 0.5
RPS4Y2Q8TD47 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.17■□□□□ 0.5
RPS4Y2Q8TD47 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.17■□□□□ 0.5
RPS4Y2Q8TD47 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
RPS4Y2Q8TD47 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.17■□□□□ 0.5
RPS4Y2Q8TD47 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.17■□□□□ 0.5
RPS4Y2Q8TD47 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
RPS4Y2Q8TD47 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RPS4Y2Q8TD47 AC005224.4-201ENST00000583262 1652 ntBASIC18.17■□□□□ 0.5
RPS4Y2Q8TD47 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RPS4Y2Q8TD47 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.17■□□□□ 0.5
RPS4Y2Q8TD47 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
RPS4Y2Q8TD47 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RPS4Y2Q8TD47 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RPS4Y2Q8TD47 AC011484.1-201ENST00000377652 1995 ntBASIC18.17■□□□□ 0.5
RPS4Y2Q8TD47 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.17■□□□□ 0.5
RPS4Y2Q8TD47 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RPS4Y2Q8TD47 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RPS4Y2Q8TD47 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RPS4Y2Q8TD47 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
RPS4Y2Q8TD47 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
RPS4Y2Q8TD47 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RPS4Y2Q8TD47 AC099778.1-201ENST00000568593 1911 ntBASIC18.16■□□□□ 0.5
RPS4Y2Q8TD47 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RPS4Y2Q8TD47 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.16■□□□□ 0.5
RPS4Y2Q8TD47 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
RPS4Y2Q8TD47 AL391422.3-201ENST00000603791 2761 ntBASIC18.16■□□□□ 0.5
RPS4Y2Q8TD47 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RPS4Y2Q8TD47 FP700111.2-201ENST00000619190 1892 ntBASIC18.16■□□□□ 0.5
RPS4Y2Q8TD47 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RPS4Y2Q8TD47 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.15■□□□□ 0.5
RPS4Y2Q8TD47 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RPS4Y2Q8TD47 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RPS4Y2Q8TD47 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RPS4Y2Q8TD47 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.15■□□□□ 0.5
RPS4Y2Q8TD47 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RPS4Y2Q8TD47 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RPS4Y2Q8TD47 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RPS4Y2Q8TD47 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.15■□□□□ 0.5
RPS4Y2Q8TD47 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.15■□□□□ 0.5
RPS4Y2Q8TD47 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RPS4Y2Q8TD47 IGHV3-19-201ENST00000521488 291 ntBASIC18.15■□□□□ 0.5
RPS4Y2Q8TD47 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.15■□□□□ 0.5
RPS4Y2Q8TD47 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RPS4Y2Q8TD47 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms