Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
LINC01560Q8TB33 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.04■□□□□ 0.48
LINC01560Q8TB33 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.04■□□□□ 0.48
LINC01560Q8TB33 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LINC01560Q8TB33 AC007322.3-201ENST00000426526 701 ntBASIC18.04■□□□□ 0.48
LINC01560Q8TB33 RPS2P4-201ENST00000476944 856 ntBASIC18.04■□□□□ 0.48
LINC01560Q8TB33 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.04■□□□□ 0.48
LINC01560Q8TB33 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.04■□□□□ 0.48
LINC01560Q8TB33 AC060766.5-201ENST00000590539 871 ntBASIC18.04■□□□□ 0.48
LINC01560Q8TB33 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
LINC01560Q8TB33 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
LINC01560Q8TB33 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
LINC01560Q8TB33 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.04■□□□□ 0.48
LINC01560Q8TB33 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LINC01560Q8TB33 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
LINC01560Q8TB33 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
LINC01560Q8TB33 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LINC01560Q8TB33 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LINC01560Q8TB33 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LINC01560Q8TB33 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LINC01560Q8TB33 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LINC01560Q8TB33 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LINC01560Q8TB33 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.03■□□□□ 0.48
LINC01560Q8TB33 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.03■□□□□ 0.48
LINC01560Q8TB33 UNC93B4-201ENST00000505679 747 ntBASIC18.03■□□□□ 0.48
LINC01560Q8TB33 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.03■□□□□ 0.48
LINC01560Q8TB33 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.03■□□□□ 0.48
LINC01560Q8TB33 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.03■□□□□ 0.48
LINC01560Q8TB33 AC008403.3-201ENST00000598924 454 ntBASIC18.03■□□□□ 0.48
LINC01560Q8TB33 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LINC01560Q8TB33 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LINC01560Q8TB33 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LINC01560Q8TB33 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LINC01560Q8TB33 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LINC01560Q8TB33 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LINC01560Q8TB33 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LINC01560Q8TB33 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
LINC01560Q8TB33 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LINC01560Q8TB33 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LINC01560Q8TB33 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
LINC01560Q8TB33 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LINC01560Q8TB33 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LINC01560Q8TB33 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LINC01560Q8TB33 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
LINC01560Q8TB33 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LINC01560Q8TB33 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.02■□□□□ 0.48
LINC01560Q8TB33 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LINC01560Q8TB33 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.02■□□□□ 0.48
LINC01560Q8TB33 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LINC01560Q8TB33 HLA-B-256ENST00000639848 1089 ntBASIC18.02■□□□□ 0.48
LINC01560Q8TB33 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
LINC01560Q8TB33 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.02■□□□□ 0.47
LINC01560Q8TB33 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
LINC01560Q8TB33 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LINC01560Q8TB33 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LINC01560Q8TB33 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LINC01560Q8TB33 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.01■□□□□ 0.47
LINC01560Q8TB33 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LINC01560Q8TB33 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.01■□□□□ 0.47
LINC01560Q8TB33 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LINC01560Q8TB33 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LINC01560Q8TB33 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.01■□□□□ 0.47
LINC01560Q8TB33 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LINC01560Q8TB33 AL596275.1-201ENST00000423464 877 ntBASIC18.01■□□□□ 0.47
LINC01560Q8TB33 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.01■□□□□ 0.47
LINC01560Q8TB33 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.01■□□□□ 0.47
LINC01560Q8TB33 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.01■□□□□ 0.47
LINC01560Q8TB33 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.01■□□□□ 0.47
LINC01560Q8TB33 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
LINC01560Q8TB33 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LINC01560Q8TB33 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.01■□□□□ 0.47
LINC01560Q8TB33 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LINC01560Q8TB33 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LINC01560Q8TB33 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LINC01560Q8TB33 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LINC01560Q8TB33 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18■□□□□ 0.47
LINC01560Q8TB33 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LINC01560Q8TB33 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LINC01560Q8TB33 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LINC01560Q8TB33 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18■□□□□ 0.47
LINC01560Q8TB33 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18■□□□□ 0.47
LINC01560Q8TB33 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18■□□□□ 0.47
LINC01560Q8TB33 SAPCD2P1-201ENST00000395413 1184 ntBASIC18■□□□□ 0.47
LINC01560Q8TB33 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18■□□□□ 0.47
LINC01560Q8TB33 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
LINC01560Q8TB33 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18■□□□□ 0.47
LINC01560Q8TB33 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
LINC01560Q8TB33 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18■□□□□ 0.47
LINC01560Q8TB33 PNMA6B-201ENST00000538162 1200 ntBASIC18■□□□□ 0.47
LINC01560Q8TB33 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18■□□□□ 0.47
LINC01560Q8TB33 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18■□□□□ 0.47
LINC01560Q8TB33 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
LINC01560Q8TB33 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LINC01560Q8TB33 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18■□□□□ 0.47
LINC01560Q8TB33 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18■□□□□ 0.47
LINC01560Q8TB33 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LINC01560Q8TB33 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LINC01560Q8TB33 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18■□□□□ 0.47
LINC01560Q8TB33 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
LINC01560Q8TB33 AC092368.3-202ENST00000574180 1591 ntBASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms