Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16.25■□□□□ 0.19
LINC01006Q8NI28 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC01006Q8NI28 KRT17P3-201ENST00000420566 1262 ntBASIC16.25■□□□□ 0.19
LINC01006Q8NI28 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC16.25■□□□□ 0.19
LINC01006Q8NI28 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
LINC01006Q8NI28 HES2-205ENST00000487437 968 ntTSL 3 BASIC16.25■□□□□ 0.19
LINC01006Q8NI28 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC01006Q8NI28 AC008550.1-201ENST00000511500 884 ntBASIC16.25■□□□□ 0.19
LINC01006Q8NI28 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.25■□□□□ 0.19
LINC01006Q8NI28 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LINC01006Q8NI28 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
LINC01006Q8NI28 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC16.25■□□□□ 0.19
LINC01006Q8NI28 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC01006Q8NI28 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC01006Q8NI28 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LINC01006Q8NI28 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC16.24■□□□□ 0.19
LINC01006Q8NI28 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC16.24■□□□□ 0.19
LINC01006Q8NI28 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC01006Q8NI28 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LINC01006Q8NI28 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.24■□□□□ 0.19
LINC01006Q8NI28 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC01006Q8NI28 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC16.24■□□□□ 0.19
LINC01006Q8NI28 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC01006Q8NI28 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC01006Q8NI28 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.24■□□□□ 0.19
LINC01006Q8NI28 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LINC01006Q8NI28 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC01006Q8NI28 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.24■□□□□ 0.19
LINC01006Q8NI28 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.24■□□□□ 0.19
LINC01006Q8NI28 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC01006Q8NI28 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LINC01006Q8NI28 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.24■□□□□ 0.19
LINC01006Q8NI28 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.24■□□□□ 0.19
LINC01006Q8NI28 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC16.24■□□□□ 0.19
LINC01006Q8NI28 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
LINC01006Q8NI28 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.24■□□□□ 0.19
LINC01006Q8NI28 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC01006Q8NI28 C9orf163-202ENST00000624034 2573 ntBASIC16.24■□□□□ 0.19
LINC01006Q8NI28 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC01006Q8NI28 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC01006Q8NI28 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC01006Q8NI28 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LINC01006Q8NI28 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LINC01006Q8NI28 CYP21A1P-202ENST00000354927 1481 ntBASIC16.23■□□□□ 0.19
LINC01006Q8NI28 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.23■□□□□ 0.19
LINC01006Q8NI28 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LINC01006Q8NI28 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC01006Q8NI28 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
LINC01006Q8NI28 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC01006Q8NI28 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC16.23■□□□□ 0.19
LINC01006Q8NI28 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.23■□□□□ 0.19
LINC01006Q8NI28 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC16.23■□□□□ 0.19
LINC01006Q8NI28 OR2A1-AS1-207ENST00000486094 819 ntBASIC16.23■□□□□ 0.19
LINC01006Q8NI28 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.23■□□□□ 0.19
LINC01006Q8NI28 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LINC01006Q8NI28 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LINC01006Q8NI28 FAM197Y4-202ENST00000622692 608 ntBASIC16.23■□□□□ 0.19
LINC01006Q8NI28 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC01006Q8NI28 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC16.23■□□□□ 0.19
LINC01006Q8NI28 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC01006Q8NI28 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC01006Q8NI28 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC01006Q8NI28 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LINC01006Q8NI28 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LINC01006Q8NI28 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC16.23■□□□□ 0.19
LINC01006Q8NI28 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
LINC01006Q8NI28 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
LINC01006Q8NI28 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC01006Q8NI28 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC01006Q8NI28 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LINC01006Q8NI28 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
LINC01006Q8NI28 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC01006Q8NI28 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LINC01006Q8NI28 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC16.22■□□□□ 0.19
LINC01006Q8NI28 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC01006Q8NI28 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LINC01006Q8NI28 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.22■□□□□ 0.19
LINC01006Q8NI28 RPPH1-201ENST00000516869 333 ntBASIC16.22■□□□□ 0.19
LINC01006Q8NI28 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.22■□□□□ 0.19
LINC01006Q8NI28 C1QBPP2-201ENST00000528754 825 ntBASIC16.22■□□□□ 0.19
LINC01006Q8NI28 REXO2-208ENST00000539754 791 ntTSL 2 BASIC16.22■□□□□ 0.19
LINC01006Q8NI28 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LINC01006Q8NI28 CRK-204ENST00000574295 1391 ntTSL 5 BASIC16.22■□□□□ 0.19
LINC01006Q8NI28 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LINC01006Q8NI28 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC16.22■□□□□ 0.19
LINC01006Q8NI28 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC16.21■□□□□ 0.19
LINC01006Q8NI28 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
LINC01006Q8NI28 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC01006Q8NI28 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LINC01006Q8NI28 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC01006Q8NI28 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC01006Q8NI28 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC01006Q8NI28 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC16.21■□□□□ 0.19
LINC01006Q8NI28 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.21■□□□□ 0.19
LINC01006Q8NI28 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.21■□□□□ 0.19
LINC01006Q8NI28 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.21■□□□□ 0.19
LINC01006Q8NI28 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.21■□□□□ 0.19
LINC01006Q8NI28 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC16.21■□□□□ 0.19
LINC01006Q8NI28 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LINC01006Q8NI28 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms