Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC71LQ8N9Z2 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC71LQ8N9Z2 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.27■□□□□ 0.35
CCDC71LQ8N9Z2 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.27■□□□□ 0.35
CCDC71LQ8N9Z2 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC17.27■□□□□ 0.35
CCDC71LQ8N9Z2 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC71LQ8N9Z2 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC71LQ8N9Z2 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC71LQ8N9Z2 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC71LQ8N9Z2 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC71LQ8N9Z2 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC71LQ8N9Z2 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC71LQ8N9Z2 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC71LQ8N9Z2 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC71LQ8N9Z2 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC71LQ8N9Z2 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC71LQ8N9Z2 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC71LQ8N9Z2 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC71LQ8N9Z2 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC71LQ8N9Z2 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CCDC71LQ8N9Z2 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC17.26■□□□□ 0.35
CCDC71LQ8N9Z2 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.26■□□□□ 0.35
CCDC71LQ8N9Z2 AC007952.6-201ENST00000573168 2673 ntBASIC17.26■□□□□ 0.35
CCDC71LQ8N9Z2 AC003957.1-201ENST00000625108 2673 ntBASIC17.26■□□□□ 0.35
CCDC71LQ8N9Z2 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.26■□□□□ 0.35
CCDC71LQ8N9Z2 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CCDC71LQ8N9Z2 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC71LQ8N9Z2 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC71LQ8N9Z2 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CCDC71LQ8N9Z2 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC71LQ8N9Z2 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
CCDC71LQ8N9Z2 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC71LQ8N9Z2 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC71LQ8N9Z2 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC71LQ8N9Z2 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CCDC71LQ8N9Z2 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC71LQ8N9Z2 AP005435.1-201ENST00000529293 1178 ntBASIC17.25■□□□□ 0.35
CCDC71LQ8N9Z2 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC71LQ8N9Z2 AL356740.2-201ENST00000601559 647 ntBASIC17.25■□□□□ 0.35
CCDC71LQ8N9Z2 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC71LQ8N9Z2 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CCDC71LQ8N9Z2 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
CCDC71LQ8N9Z2 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC71LQ8N9Z2 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC71LQ8N9Z2 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC71LQ8N9Z2 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC71LQ8N9Z2 AC020907.5-201ENST00000624372 1936 ntBASIC17.25■□□□□ 0.35
CCDC71LQ8N9Z2 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC71LQ8N9Z2 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC71LQ8N9Z2 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.25■□□□□ 0.35
CCDC71LQ8N9Z2 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CCDC71LQ8N9Z2 AC007225.1-201ENST00000566331 1836 ntBASIC17.24■□□□□ 0.35
CCDC71LQ8N9Z2 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC71LQ8N9Z2 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC71LQ8N9Z2 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CCDC71LQ8N9Z2 SRD5A1P1-201ENST00000442297 786 ntBASIC17.24■□□□□ 0.35
CCDC71LQ8N9Z2 UNC93B8-201ENST00000511903 705 ntBASIC17.24■□□□□ 0.35
CCDC71LQ8N9Z2 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC71LQ8N9Z2 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC71LQ8N9Z2 AC027702.1-201ENST00000563810 1770 ntBASIC17.24■□□□□ 0.35
CCDC71LQ8N9Z2 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC71LQ8N9Z2 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC71LQ8N9Z2 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
CCDC71LQ8N9Z2 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CCDC71LQ8N9Z2 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC71LQ8N9Z2 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC71LQ8N9Z2 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC71LQ8N9Z2 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CCDC71LQ8N9Z2 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC71LQ8N9Z2 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC71LQ8N9Z2 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CCDC71LQ8N9Z2 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC71LQ8N9Z2 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC71LQ8N9Z2 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CCDC71LQ8N9Z2 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CCDC71LQ8N9Z2 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC71LQ8N9Z2 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
CCDC71LQ8N9Z2 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC71LQ8N9Z2 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC71LQ8N9Z2 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC71LQ8N9Z2 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC71LQ8N9Z2 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC71LQ8N9Z2 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC71LQ8N9Z2 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC71LQ8N9Z2 KRT16P3-201ENST00000439127 1283 ntBASIC17.23■□□□□ 0.35
CCDC71LQ8N9Z2 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC71LQ8N9Z2 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC71LQ8N9Z2 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC71LQ8N9Z2 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC71LQ8N9Z2 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CCDC71LQ8N9Z2 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC71LQ8N9Z2 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC71LQ8N9Z2 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CCDC71LQ8N9Z2 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
CCDC71LQ8N9Z2 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC71LQ8N9Z2 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC71LQ8N9Z2 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC71LQ8N9Z2 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC71LQ8N9Z2 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.22■□□□□ 0.35
CCDC71LQ8N9Z2 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms