Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC16.87■□□□□ 0.29
LINC00311Q8N616 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LINC00311Q8N616 UBE2DNL-204ENST00000602536 740 ntBASIC16.87■□□□□ 0.29
LINC00311Q8N616 MIR5787-201ENST00000611784 55 ntBASIC16.87■□□□□ 0.29
LINC00311Q8N616 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC16.87■□□□□ 0.29
LINC00311Q8N616 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC16.87■□□□□ 0.29
LINC00311Q8N616 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LINC00311Q8N616 PLK5-205ENST00000642079 1969 ntBASIC16.87■□□□□ 0.29
LINC00311Q8N616 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LINC00311Q8N616 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LINC00311Q8N616 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LINC00311Q8N616 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LINC00311Q8N616 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LINC00311Q8N616 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC00311Q8N616 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC00311Q8N616 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LINC00311Q8N616 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC00311Q8N616 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC16.86■□□□□ 0.29
LINC00311Q8N616 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
LINC00311Q8N616 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LINC00311Q8N616 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC16.86■□□□□ 0.29
LINC00311Q8N616 CD44-222ENST00000526025 1052 ntTSL 2 BASIC16.86■□□□□ 0.29
LINC00311Q8N616 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC16.86■□□□□ 0.29
LINC00311Q8N616 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC16.86■□□□□ 0.29
LINC00311Q8N616 FGF8-207ENST00000618991 856 ntTSL 3 BASIC16.86■□□□□ 0.29
LINC00311Q8N616 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC00311Q8N616 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC00311Q8N616 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC16.86■□□□□ 0.29
LINC00311Q8N616 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LINC00311Q8N616 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC16.86■□□□□ 0.29
LINC00311Q8N616 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
LINC00311Q8N616 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC00311Q8N616 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LINC00311Q8N616 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
LINC00311Q8N616 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC16.86■□□□□ 0.29
LINC00311Q8N616 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC00311Q8N616 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
LINC00311Q8N616 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC00311Q8N616 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC00311Q8N616 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC00311Q8N616 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC00311Q8N616 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC00311Q8N616 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC00311Q8N616 STX7-201ENST00000367937 1090 ntTSL 5 BASIC16.85■□□□□ 0.29
LINC00311Q8N616 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC16.85■□□□□ 0.29
LINC00311Q8N616 PTPA-214ENST00000423100 988 ntTSL 2 BASIC16.85■□□□□ 0.29
LINC00311Q8N616 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC00311Q8N616 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC16.85■□□□□ 0.29
LINC00311Q8N616 DBI-210ENST00000542275 757 ntTSL 5 BASIC16.85■□□□□ 0.29
LINC00311Q8N616 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
LINC00311Q8N616 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC00311Q8N616 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC00311Q8N616 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
LINC00311Q8N616 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC00311Q8N616 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LINC00311Q8N616 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC00311Q8N616 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
LINC00311Q8N616 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LINC00311Q8N616 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC00311Q8N616 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC00311Q8N616 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC16.85■□□□□ 0.29
LINC00311Q8N616 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
LINC00311Q8N616 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC00311Q8N616 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC00311Q8N616 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC16.84■□□□□ 0.29
LINC00311Q8N616 AC116050.2-201ENST00000612102 1779 ntBASIC16.84■□□□□ 0.29
LINC00311Q8N616 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC16.84■□□□□ 0.29
LINC00311Q8N616 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LINC00311Q8N616 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC00311Q8N616 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC16.84■□□□□ 0.29
LINC00311Q8N616 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC00311Q8N616 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC00311Q8N616 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LINC00311Q8N616 PARP1-202ENST00000366792 553 ntTSL 3 BASIC16.84■□□□□ 0.29
LINC00311Q8N616 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
LINC00311Q8N616 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC16.84■□□□□ 0.29
LINC00311Q8N616 HSCB-202ENST00000398941 955 ntTSL 2 BASIC16.84■□□□□ 0.29
LINC00311Q8N616 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC00311Q8N616 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC16.84■□□□□ 0.29
LINC00311Q8N616 AC091799.1-201ENST00000422823 811 ntBASIC16.84■□□□□ 0.29
LINC00311Q8N616 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
LINC00311Q8N616 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC16.84■□□□□ 0.29
LINC00311Q8N616 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC16.84■□□□□ 0.29
LINC00311Q8N616 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
LINC00311Q8N616 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC16.84■□□□□ 0.29
LINC00311Q8N616 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
LINC00311Q8N616 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC00311Q8N616 USP48-205ENST00000421625 2818 ntTSL 2 BASIC16.84■□□□□ 0.29
LINC00311Q8N616 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC00311Q8N616 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LINC00311Q8N616 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC16.84■□□□□ 0.29
LINC00311Q8N616 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC00311Q8N616 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC00311Q8N616 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LINC00311Q8N616 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LINC00311Q8N616 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
LINC00311Q8N616 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
LINC00311Q8N616 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC16.83■□□□□ 0.28
LINC00311Q8N616 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LINC00311Q8N616 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms