Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
ARHGEF39Q8N4T4 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ARHGEF39Q8N4T4 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.71■□□□□ 0.75
ARHGEF39Q8N4T4 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
ARHGEF39Q8N4T4 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARHGEF39Q8N4T4 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
ARHGEF39Q8N4T4 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.7■□□□□ 0.74
ARHGEF39Q8N4T4 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
ARHGEF39Q8N4T4 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.7■□□□□ 0.74
ARHGEF39Q8N4T4 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARHGEF39Q8N4T4 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.7■□□□□ 0.74
ARHGEF39Q8N4T4 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ARHGEF39Q8N4T4 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.7■□□□□ 0.74
ARHGEF39Q8N4T4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ARHGEF39Q8N4T4 AL024507.2-201ENST00000606070 2574 ntBASIC19.7■□□□□ 0.74
ARHGEF39Q8N4T4 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ARHGEF39Q8N4T4 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARHGEF39Q8N4T4 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARHGEF39Q8N4T4 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
ARHGEF39Q8N4T4 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.7■□□□□ 0.74
ARHGEF39Q8N4T4 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARHGEF39Q8N4T4 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.69■□□□□ 0.74
ARHGEF39Q8N4T4 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
ARHGEF39Q8N4T4 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.69■□□□□ 0.74
ARHGEF39Q8N4T4 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.69■□□□□ 0.74
ARHGEF39Q8N4T4 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.69■□□□□ 0.74
ARHGEF39Q8N4T4 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.69■□□□□ 0.74
ARHGEF39Q8N4T4 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
ARHGEF39Q8N4T4 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.69■□□□□ 0.74
ARHGEF39Q8N4T4 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.69■□□□□ 0.74
ARHGEF39Q8N4T4 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.69■□□□□ 0.74
ARHGEF39Q8N4T4 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.69■□□□□ 0.74
ARHGEF39Q8N4T4 AL121832.2-201ENST00000610979 668 ntBASIC19.69■□□□□ 0.74
ARHGEF39Q8N4T4 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.69■□□□□ 0.74
ARHGEF39Q8N4T4 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ARHGEF39Q8N4T4 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARHGEF39Q8N4T4 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ARHGEF39Q8N4T4 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
ARHGEF39Q8N4T4 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ARHGEF39Q8N4T4 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ARHGEF39Q8N4T4 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ARHGEF39Q8N4T4 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
ARHGEF39Q8N4T4 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.68■□□□□ 0.74
ARHGEF39Q8N4T4 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ARHGEF39Q8N4T4 HLA-L-209ENST00000420110 1011 ntBASIC19.68■□□□□ 0.74
ARHGEF39Q8N4T4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
ARHGEF39Q8N4T4 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ARHGEF39Q8N4T4 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
ARHGEF39Q8N4T4 AC083906.2-201ENST00000511578 360 ntBASIC19.68■□□□□ 0.74
ARHGEF39Q8N4T4 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ARHGEF39Q8N4T4 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.68■□□□□ 0.74
ARHGEF39Q8N4T4 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.68■□□□□ 0.74
ARHGEF39Q8N4T4 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
ARHGEF39Q8N4T4 AC104771.1-201ENST00000603335 964 ntBASIC19.68■□□□□ 0.74
ARHGEF39Q8N4T4 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.68■□□□□ 0.74
ARHGEF39Q8N4T4 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.68■□□□□ 0.74
ARHGEF39Q8N4T4 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ARHGEF39Q8N4T4 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
ARHGEF39Q8N4T4 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
ARHGEF39Q8N4T4 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
ARHGEF39Q8N4T4 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
ARHGEF39Q8N4T4 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ARHGEF39Q8N4T4 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ARHGEF39Q8N4T4 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ARHGEF39Q8N4T4 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ARHGEF39Q8N4T4 FEM1AP4-201ENST00000443167 1987 ntBASIC19.67■□□□□ 0.74
ARHGEF39Q8N4T4 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ARHGEF39Q8N4T4 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.67■□□□□ 0.74
ARHGEF39Q8N4T4 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.67■□□□□ 0.74
ARHGEF39Q8N4T4 RARRES2P4-201ENST00000514074 484 ntBASIC19.67■□□□□ 0.74
ARHGEF39Q8N4T4 FAM21FP-204ENST00000608637 956 ntBASIC19.67■□□□□ 0.74
ARHGEF39Q8N4T4 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.67■□□□□ 0.74
ARHGEF39Q8N4T4 OR10C1-204ENST00000622521 1039 ntBASIC19.67■□□□□ 0.74
ARHGEF39Q8N4T4 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.67■□□□□ 0.74
ARHGEF39Q8N4T4 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ARHGEF39Q8N4T4 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ARHGEF39Q8N4T4 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ARHGEF39Q8N4T4 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.67■□□□□ 0.74
ARHGEF39Q8N4T4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ARHGEF39Q8N4T4 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ARHGEF39Q8N4T4 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ARHGEF39Q8N4T4 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ARHGEF39Q8N4T4 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ARHGEF39Q8N4T4 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ARHGEF39Q8N4T4 GPX1P1-201ENST00000388829 606 ntBASIC19.66■□□□□ 0.74
ARHGEF39Q8N4T4 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
ARHGEF39Q8N4T4 AL512625.2-201ENST00000417533 625 ntBASIC19.66■□□□□ 0.74
ARHGEF39Q8N4T4 TSPY6P-201ENST00000448518 926 ntBASIC19.66■□□□□ 0.74
ARHGEF39Q8N4T4 AC093787.1-201ENST00000450396 207 ntBASIC19.66■□□□□ 0.74
ARHGEF39Q8N4T4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.66■□□□□ 0.74
ARHGEF39Q8N4T4 AC026310.3-201ENST00000625186 2373 ntBASIC19.66■□□□□ 0.74
ARHGEF39Q8N4T4 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
ARHGEF39Q8N4T4 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.66■□□□□ 0.74
ARHGEF39Q8N4T4 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ARHGEF39Q8N4T4 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
ARHGEF39Q8N4T4 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ARHGEF39Q8N4T4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
ARHGEF39Q8N4T4 AF201337.1-201ENST00000520239 748 ntBASIC19.65■□□□□ 0.74
ARHGEF39Q8N4T4 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ARHGEF39Q8N4T4 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms