Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SYNPOQ8N3V7 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SYNPOQ8N3V7 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
SYNPOQ8N3V7 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.19■□□□□ 0.98
SYNPOQ8N3V7 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
SYNPOQ8N3V7 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.19■□□□□ 0.98
SYNPOQ8N3V7 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
SYNPOQ8N3V7 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SYNPOQ8N3V7 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SYNPOQ8N3V7 MCRIP2P1-201ENST00000394346 511 ntBASIC21.19■□□□□ 0.98
SYNPOQ8N3V7 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SYNPOQ8N3V7 AL355472.2-201ENST00000422958 438 ntBASIC21.19■□□□□ 0.98
SYNPOQ8N3V7 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
SYNPOQ8N3V7 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SYNPOQ8N3V7 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.19■□□□□ 0.98
SYNPOQ8N3V7 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.19■□□□□ 0.98
SYNPOQ8N3V7 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SYNPOQ8N3V7 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SYNPOQ8N3V7 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SYNPOQ8N3V7 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SYNPOQ8N3V7 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SYNPOQ8N3V7 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.18■□□□□ 0.98
SYNPOQ8N3V7 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SYNPOQ8N3V7 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SYNPOQ8N3V7 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
SYNPOQ8N3V7 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.18■□□□□ 0.98
SYNPOQ8N3V7 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
SYNPOQ8N3V7 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.18■□□□□ 0.98
SYNPOQ8N3V7 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.18■□□□□ 0.98
SYNPOQ8N3V7 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.18■□□□□ 0.98
SYNPOQ8N3V7 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SYNPOQ8N3V7 EP400NL-214ENST00000641289 2402 ntBASIC21.18■□□□□ 0.98
SYNPOQ8N3V7 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SYNPOQ8N3V7 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
SYNPOQ8N3V7 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SYNPOQ8N3V7 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SYNPOQ8N3V7 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SYNPOQ8N3V7 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SYNPOQ8N3V7 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SYNPOQ8N3V7 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SYNPOQ8N3V7 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SYNPOQ8N3V7 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.17■□□□□ 0.98
SYNPOQ8N3V7 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SYNPOQ8N3V7 KRT17P3-201ENST00000420566 1262 ntBASIC21.17■□□□□ 0.98
SYNPOQ8N3V7 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SYNPOQ8N3V7 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.17■□□□□ 0.98
SYNPOQ8N3V7 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.17■□□□□ 0.98
SYNPOQ8N3V7 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.17■□□□□ 0.98
SYNPOQ8N3V7 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
SYNPOQ8N3V7 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.17■□□□□ 0.98
SYNPOQ8N3V7 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SYNPOQ8N3V7 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SYNPOQ8N3V7 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
SYNPOQ8N3V7 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SYNPOQ8N3V7 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SYNPOQ8N3V7 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SYNPOQ8N3V7 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
SYNPOQ8N3V7 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SYNPOQ8N3V7 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SYNPOQ8N3V7 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SYNPOQ8N3V7 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SYNPOQ8N3V7 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SYNPOQ8N3V7 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
SYNPOQ8N3V7 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
SYNPOQ8N3V7 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SYNPOQ8N3V7 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.16■□□□□ 0.98
SYNPOQ8N3V7 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
SYNPOQ8N3V7 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SYNPOQ8N3V7 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SYNPOQ8N3V7 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SYNPOQ8N3V7 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.16■□□□□ 0.98
SYNPOQ8N3V7 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
SYNPOQ8N3V7 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.16■□□□□ 0.98
SYNPOQ8N3V7 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
SYNPOQ8N3V7 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SYNPOQ8N3V7 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SYNPOQ8N3V7 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SYNPOQ8N3V7 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
SYNPOQ8N3V7 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SYNPOQ8N3V7 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SYNPOQ8N3V7 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.15■□□□□ 0.98
SYNPOQ8N3V7 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.15■□□□□ 0.98
SYNPOQ8N3V7 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SYNPOQ8N3V7 PNMA6B-201ENST00000538162 1200 ntBASIC21.15■□□□□ 0.98
SYNPOQ8N3V7 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC21.15■□□□□ 0.98
SYNPOQ8N3V7 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.15■□□□□ 0.98
SYNPOQ8N3V7 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SYNPOQ8N3V7 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SYNPOQ8N3V7 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.98
SYNPOQ8N3V7 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SYNPOQ8N3V7 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SYNPOQ8N3V7 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.98
SYNPOQ8N3V7 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
SYNPOQ8N3V7 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.14■□□□□ 0.97
SYNPOQ8N3V7 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SYNPOQ8N3V7 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.14■□□□□ 0.97
SYNPOQ8N3V7 RPPH1-201ENST00000516869 333 ntBASIC21.14■□□□□ 0.97
SYNPOQ8N3V7 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SYNPOQ8N3V7 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
SYNPOQ8N3V7 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms