Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC31.2■■■□□ 2.59
ABCA6Q8N139 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
ABCA6Q8N139 AC097493.4-201ENST00000641197 219 ntBASIC31.2■■■□□ 2.59
ABCA6Q8N139 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC31.2■■■□□ 2.59
ABCA6Q8N139 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC31.2■■■□□ 2.59
ABCA6Q8N139 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
ABCA6Q8N139 GCA-201ENST00000233612 1694 ntTSL 2 BASIC31.2■■■□□ 2.59
ABCA6Q8N139 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC31.2■■■□□ 2.59
ABCA6Q8N139 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
ABCA6Q8N139 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
ABCA6Q8N139 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC31.2■■■□□ 2.58
ABCA6Q8N139 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC31.2■■■□□ 2.58
ABCA6Q8N139 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC31.2■■■□□ 2.58
ABCA6Q8N139 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC31.2■■■□□ 2.58
ABCA6Q8N139 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC31.2■■■□□ 2.58
ABCA6Q8N139 AC133561.5-201ENST00000635547 218 ntBASIC31.2■■■□□ 2.58
ABCA6Q8N139 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC31.19■■■□□ 2.58
ABCA6Q8N139 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
ABCA6Q8N139 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC31.19■■■□□ 2.58
ABCA6Q8N139 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
ABCA6Q8N139 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC31.19■■■□□ 2.58
ABCA6Q8N139 AL445228.2-201ENST00000605589 952 ntBASIC31.19■■■□□ 2.58
ABCA6Q8N139 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
ABCA6Q8N139 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC31.19■■■□□ 2.58
ABCA6Q8N139 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
ABCA6Q8N139 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC31.19■■■□□ 2.58
ABCA6Q8N139 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC31.18■■■□□ 2.58
ABCA6Q8N139 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
ABCA6Q8N139 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
ABCA6Q8N139 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC31.18■■■□□ 2.58
ABCA6Q8N139 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
ABCA6Q8N139 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC31.18■■■□□ 2.58
ABCA6Q8N139 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
ABCA6Q8N139 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
ABCA6Q8N139 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC31.17■■■□□ 2.58
ABCA6Q8N139 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
ABCA6Q8N139 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC31.17■■■□□ 2.58
ABCA6Q8N139 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC31.17■■■□□ 2.58
ABCA6Q8N139 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
ABCA6Q8N139 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
ABCA6Q8N139 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC31.17■■■□□ 2.58
ABCA6Q8N139 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC31.16■■■□□ 2.58
ABCA6Q8N139 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC31.16■■■□□ 2.58
ABCA6Q8N139 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC31.16■■■□□ 2.58
ABCA6Q8N139 HES2-205ENST00000487437 968 ntTSL 3 BASIC31.16■■■□□ 2.58
ABCA6Q8N139 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC31.16■■■□□ 2.58
ABCA6Q8N139 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC31.16■■■□□ 2.58
ABCA6Q8N139 MIR4785-201ENST00000585005 73 ntBASIC31.16■■■□□ 2.58
ABCA6Q8N139 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
ABCA6Q8N139 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC31.16■■■□□ 2.58
ABCA6Q8N139 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
ABCA6Q8N139 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
ABCA6Q8N139 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC31.16■■■□□ 2.58
ABCA6Q8N139 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC31.16■■■□□ 2.58
ABCA6Q8N139 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC31.16■■■□□ 2.58
ABCA6Q8N139 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC31.16■■■□□ 2.58
ABCA6Q8N139 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC31.16■■■□□ 2.58
ABCA6Q8N139 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC31.16■■■□□ 2.58
ABCA6Q8N139 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
ABCA6Q8N139 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
ABCA6Q8N139 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC31.15■■■□□ 2.58
ABCA6Q8N139 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
ABCA6Q8N139 TK2-213ENST00000563369 882 ntTSL 5 BASIC31.15■■■□□ 2.58
ABCA6Q8N139 RN7SL850P-201ENST00000579959 291 ntBASIC31.15■■■□□ 2.58
ABCA6Q8N139 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC31.15■■■□□ 2.58
ABCA6Q8N139 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
ABCA6Q8N139 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
ABCA6Q8N139 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
ABCA6Q8N139 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC31.14■■■□□ 2.58
ABCA6Q8N139 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
ABCA6Q8N139 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC31.14■■■□□ 2.58
ABCA6Q8N139 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
ABCA6Q8N139 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
ABCA6Q8N139 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC31.14■■■□□ 2.58
ABCA6Q8N139 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
ABCA6Q8N139 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC31.14■■■□□ 2.57
ABCA6Q8N139 PENK-204ENST00000518770 863 ntTSL 2 BASIC31.13■■■□□ 2.57
ABCA6Q8N139 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC31.13■■■□□ 2.57
ABCA6Q8N139 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
ABCA6Q8N139 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
ABCA6Q8N139 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
ABCA6Q8N139 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC31.13■■■□□ 2.57
ABCA6Q8N139 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
ABCA6Q8N139 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
ABCA6Q8N139 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC31.12■■■□□ 2.57
ABCA6Q8N139 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
ABCA6Q8N139 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
ABCA6Q8N139 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC31.12■■■□□ 2.57
ABCA6Q8N139 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC31.12■■■□□ 2.57
ABCA6Q8N139 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC31.12■■■□□ 2.57
ABCA6Q8N139 TK2-204ENST00000525974 1178 ntTSL 2 BASIC31.12■■■□□ 2.57
ABCA6Q8N139 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC31.12■■■□□ 2.57
ABCA6Q8N139 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC31.11■■■□□ 2.57
ABCA6Q8N139 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
ABCA6Q8N139 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC31.11■■■□□ 2.57
ABCA6Q8N139 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC31.11■■■□□ 2.57
ABCA6Q8N139 AL023875.1-201ENST00000640777 796 ntBASIC31.11■■■□□ 2.57
ABCA6Q8N139 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
ABCA6Q8N139 LTK-203ENST00000453182 2412 ntTSL 2 BASIC31.11■■■□□ 2.57
ABCA6Q8N139 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms