Protein–RNA interactions for Protein: Q8N0S2

SYCE1, Synaptonemal complex central element protein 1, humanhuman

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE1Q8N0S2 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SYCE1Q8N0S2 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.95■■□□□ 1.1
SYCE1Q8N0S2 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SYCE1Q8N0S2 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SYCE1Q8N0S2 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SYCE1Q8N0S2 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.95■■□□□ 1.1
SYCE1Q8N0S2 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
SYCE1Q8N0S2 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SYCE1Q8N0S2 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SYCE1Q8N0S2 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
SYCE1Q8N0S2 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
SYCE1Q8N0S2 AC020907.5-201ENST00000624372 1936 ntBASIC21.94■■□□□ 1.1
SYCE1Q8N0S2 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.94■■□□□ 1.1
SYCE1Q8N0S2 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SYCE1Q8N0S2 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.94■■□□□ 1.1
SYCE1Q8N0S2 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SYCE1Q8N0S2 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SYCE1Q8N0S2 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.94■■□□□ 1.1
SYCE1Q8N0S2 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.94■■□□□ 1.1
SYCE1Q8N0S2 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SYCE1Q8N0S2 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
SYCE1Q8N0S2 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
SYCE1Q8N0S2 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SYCE1Q8N0S2 BX005040.4-201ENST00000637145 1518 ntBASIC21.94■■□□□ 1.1
SYCE1Q8N0S2 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SYCE1Q8N0S2 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
SYCE1Q8N0S2 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SYCE1Q8N0S2 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
SYCE1Q8N0S2 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SYCE1Q8N0S2 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SYCE1Q8N0S2 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SYCE1Q8N0S2 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.93■■□□□ 1.1
SYCE1Q8N0S2 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.93■■□□□ 1.1
SYCE1Q8N0S2 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SYCE1Q8N0S2 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SYCE1Q8N0S2 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.93■■□□□ 1.1
SYCE1Q8N0S2 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
SYCE1Q8N0S2 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.93■■□□□ 1.1
SYCE1Q8N0S2 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
SYCE1Q8N0S2 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
SYCE1Q8N0S2 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SYCE1Q8N0S2 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.93■■□□□ 1.1
SYCE1Q8N0S2 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SYCE1Q8N0S2 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SYCE1Q8N0S2 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SYCE1Q8N0S2 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.92■■□□□ 1.1
SYCE1Q8N0S2 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SYCE1Q8N0S2 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SYCE1Q8N0S2 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
SYCE1Q8N0S2 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
SYCE1Q8N0S2 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SYCE1Q8N0S2 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SYCE1Q8N0S2 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.92■■□□□ 1.1
SYCE1Q8N0S2 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.92■■□□□ 1.1
SYCE1Q8N0S2 AC008764.7-201ENST00000593779 1081 ntBASIC21.92■■□□□ 1.1
SYCE1Q8N0S2 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.92■■□□□ 1.1
SYCE1Q8N0S2 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.92■■□□□ 1.1
SYCE1Q8N0S2 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.92■■□□□ 1.1
SYCE1Q8N0S2 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.92■■□□□ 1.1
SYCE1Q8N0S2 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
SYCE1Q8N0S2 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SYCE1Q8N0S2 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SYCE1Q8N0S2 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
SYCE1Q8N0S2 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SYCE1Q8N0S2 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
SYCE1Q8N0S2 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SYCE1Q8N0S2 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
SYCE1Q8N0S2 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SYCE1Q8N0S2 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SYCE1Q8N0S2 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SYCE1Q8N0S2 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SYCE1Q8N0S2 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SYCE1Q8N0S2 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.91■■□□□ 1.1
SYCE1Q8N0S2 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.91■■□□□ 1.1
SYCE1Q8N0S2 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.91■■□□□ 1.1
SYCE1Q8N0S2 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.91■■□□□ 1.1
SYCE1Q8N0S2 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SYCE1Q8N0S2 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
SYCE1Q8N0S2 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SYCE1Q8N0S2 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
SYCE1Q8N0S2 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
SYCE1Q8N0S2 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SYCE1Q8N0S2 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SYCE1Q8N0S2 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.9■■□□□ 1.1
SYCE1Q8N0S2 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.9■■□□□ 1.1
SYCE1Q8N0S2 TSPY26P-201ENST00000476365 1326 ntBASIC21.9■■□□□ 1.1
SYCE1Q8N0S2 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
SYCE1Q8N0S2 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SYCE1Q8N0S2 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.9■■□□□ 1.1
SYCE1Q8N0S2 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SYCE1Q8N0S2 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.9■■□□□ 1.1
SYCE1Q8N0S2 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SYCE1Q8N0S2 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
SYCE1Q8N0S2 AC027682.1-201ENST00000562846 899 ntBASIC21.9■■□□□ 1.1
SYCE1Q8N0S2 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SYCE1Q8N0S2 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SYCE1Q8N0S2 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.9■■□□□ 1.1
SYCE1Q8N0S2 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.9■■□□□ 1.1
SYCE1Q8N0S2 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.9■■□□□ 1.1
SYCE1Q8N0S2 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms