Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPNE9Q8IYJ1 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CPNE9Q8IYJ1 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPNE9Q8IYJ1 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPNE9Q8IYJ1 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.53■□□□□ 0.88
CPNE9Q8IYJ1 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPNE9Q8IYJ1 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CPNE9Q8IYJ1 AC004854.2-201ENST00000608450 1441 ntBASIC20.53■□□□□ 0.88
CPNE9Q8IYJ1 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CPNE9Q8IYJ1 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CPNE9Q8IYJ1 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CPNE9Q8IYJ1 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CPNE9Q8IYJ1 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.52■□□□□ 0.88
CPNE9Q8IYJ1 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
CPNE9Q8IYJ1 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CPNE9Q8IYJ1 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CPNE9Q8IYJ1 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.52■□□□□ 0.88
CPNE9Q8IYJ1 POU5F1P4-201ENST00000413175 1085 ntBASIC20.52■□□□□ 0.88
CPNE9Q8IYJ1 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.52■□□□□ 0.88
CPNE9Q8IYJ1 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CPNE9Q8IYJ1 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CPNE9Q8IYJ1 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
CPNE9Q8IYJ1 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CPNE9Q8IYJ1 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CPNE9Q8IYJ1 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
CPNE9Q8IYJ1 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CPNE9Q8IYJ1 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.51■□□□□ 0.87
CPNE9Q8IYJ1 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.51■□□□□ 0.87
CPNE9Q8IYJ1 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPNE9Q8IYJ1 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CPNE9Q8IYJ1 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CPNE9Q8IYJ1 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CPNE9Q8IYJ1 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPNE9Q8IYJ1 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.51■□□□□ 0.87
CPNE9Q8IYJ1 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.51■□□□□ 0.87
CPNE9Q8IYJ1 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CPNE9Q8IYJ1 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.51■□□□□ 0.87
CPNE9Q8IYJ1 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.51■□□□□ 0.87
CPNE9Q8IYJ1 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.51■□□□□ 0.87
CPNE9Q8IYJ1 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPNE9Q8IYJ1 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.51■□□□□ 0.87
CPNE9Q8IYJ1 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPNE9Q8IYJ1 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CPNE9Q8IYJ1 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.5■□□□□ 0.87
CPNE9Q8IYJ1 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.5■□□□□ 0.87
CPNE9Q8IYJ1 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPNE9Q8IYJ1 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPNE9Q8IYJ1 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPNE9Q8IYJ1 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.5■□□□□ 0.87
CPNE9Q8IYJ1 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPNE9Q8IYJ1 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.5■□□□□ 0.87
CPNE9Q8IYJ1 DUX4L2-201ENST00000561772 1275 ntBASIC20.5■□□□□ 0.87
CPNE9Q8IYJ1 AP001160.3-201ENST00000601484 763 ntBASIC20.5■□□□□ 0.87
CPNE9Q8IYJ1 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.5■□□□□ 0.87
CPNE9Q8IYJ1 DUX4L6-201ENST00000626483 1275 ntBASIC20.5■□□□□ 0.87
CPNE9Q8IYJ1 DUX4L1-201ENST00000627662 1275 ntBASIC20.5■□□□□ 0.87
CPNE9Q8IYJ1 DUX4L8-201ENST00000629013 1275 ntBASIC20.5■□□□□ 0.87
CPNE9Q8IYJ1 DUX4L3-201ENST00000630187 1275 ntBASIC20.5■□□□□ 0.87
CPNE9Q8IYJ1 DUX4L7-201ENST00000630678 1275 ntBASIC20.5■□□□□ 0.87
CPNE9Q8IYJ1 DUX4L5-201ENST00000630834 1275 ntBASIC20.5■□□□□ 0.87
CPNE9Q8IYJ1 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CPNE9Q8IYJ1 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.5■□□□□ 0.87
CPNE9Q8IYJ1 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CPNE9Q8IYJ1 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.5■□□□□ 0.87
CPNE9Q8IYJ1 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CPNE9Q8IYJ1 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CPNE9Q8IYJ1 PLK5-205ENST00000642079 1969 ntBASIC20.5■□□□□ 0.87
CPNE9Q8IYJ1 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CPNE9Q8IYJ1 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CPNE9Q8IYJ1 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CPNE9Q8IYJ1 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CPNE9Q8IYJ1 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPNE9Q8IYJ1 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CPNE9Q8IYJ1 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPNE9Q8IYJ1 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.49■□□□□ 0.87
CPNE9Q8IYJ1 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.49■□□□□ 0.87
CPNE9Q8IYJ1 KRT18P61-201ENST00000585825 1298 ntBASIC20.49■□□□□ 0.87
CPNE9Q8IYJ1 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPNE9Q8IYJ1 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CPNE9Q8IYJ1 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CPNE9Q8IYJ1 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPNE9Q8IYJ1 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPNE9Q8IYJ1 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
CPNE9Q8IYJ1 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.48■□□□□ 0.87
CPNE9Q8IYJ1 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE9Q8IYJ1 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CPNE9Q8IYJ1 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE9Q8IYJ1 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.48■□□□□ 0.87
CPNE9Q8IYJ1 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE9Q8IYJ1 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE9Q8IYJ1 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.48■□□□□ 0.87
CPNE9Q8IYJ1 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CPNE9Q8IYJ1 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE9Q8IYJ1 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE9Q8IYJ1 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.48■□□□□ 0.87
CPNE9Q8IYJ1 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE9Q8IYJ1 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPNE9Q8IYJ1 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
CPNE9Q8IYJ1 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CPNE9Q8IYJ1 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms