Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRC28Q86X40 AL391422.3-201ENST00000603791 2761 ntBASIC18.42■□□□□ 0.54
LRRC28Q86X40 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.42■□□□□ 0.54
LRRC28Q86X40 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.42■□□□□ 0.54
LRRC28Q86X40 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
LRRC28Q86X40 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.42■□□□□ 0.54
LRRC28Q86X40 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.42■□□□□ 0.54
LRRC28Q86X40 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.42■□□□□ 0.54
LRRC28Q86X40 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LRRC28Q86X40 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.42■□□□□ 0.54
LRRC28Q86X40 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRC28Q86X40 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.42■□□□□ 0.54
LRRC28Q86X40 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRC28Q86X40 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
LRRC28Q86X40 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.42■□□□□ 0.54
LRRC28Q86X40 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRC28Q86X40 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.42■□□□□ 0.54
LRRC28Q86X40 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRC28Q86X40 AC073314.1-201ENST00000568729 2216 ntBASIC18.42■□□□□ 0.54
LRRC28Q86X40 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRC28Q86X40 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRRC28Q86X40 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC28Q86X40 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
LRRC28Q86X40 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC28Q86X40 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
LRRC28Q86X40 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC28Q86X40 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC28Q86X40 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.41■□□□□ 0.54
LRRC28Q86X40 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC28Q86X40 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
LRRC28Q86X40 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC28Q86X40 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.41■□□□□ 0.54
LRRC28Q86X40 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.41■□□□□ 0.54
LRRC28Q86X40 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
LRRC28Q86X40 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC28Q86X40 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
LRRC28Q86X40 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRRC28Q86X40 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
LRRC28Q86X40 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC28Q86X40 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC28Q86X40 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.4■□□□□ 0.54
LRRC28Q86X40 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC28Q86X40 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC28Q86X40 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC28Q86X40 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC28Q86X40 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC28Q86X40 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.4■□□□□ 0.54
LRRC28Q86X40 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC28Q86X40 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
LRRC28Q86X40 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRRC28Q86X40 AC068587.7-201ENST00000641602 218 ntBASIC18.4■□□□□ 0.54
LRRC28Q86X40 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
LRRC28Q86X40 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
LRRC28Q86X40 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
LRRC28Q86X40 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.4■□□□□ 0.54
LRRC28Q86X40 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
LRRC28Q86X40 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.54
LRRC28Q86X40 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.39■□□□□ 0.54
LRRC28Q86X40 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.39■□□□□ 0.54
LRRC28Q86X40 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC28Q86X40 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
LRRC28Q86X40 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC28Q86X40 AFG3L1P-217ENST00000557444 2447 ntBASIC18.39■□□□□ 0.53
LRRC28Q86X40 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC28Q86X40 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC28Q86X40 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC28Q86X40 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC28Q86X40 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC28Q86X40 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
LRRC28Q86X40 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC28Q86X40 AC079089.2-201ENST00000531211 1277 ntBASIC18.39■□□□□ 0.53
LRRC28Q86X40 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC28Q86X40 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC28Q86X40 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.39■□□□□ 0.53
LRRC28Q86X40 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC28Q86X40 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC28Q86X40 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC28Q86X40 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC28Q86X40 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.39■□□□□ 0.53
LRRC28Q86X40 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRC28Q86X40 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.39■□□□□ 0.53
LRRC28Q86X40 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.39■□□□□ 0.53
LRRC28Q86X40 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC28Q86X40 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.38■□□□□ 0.53
LRRC28Q86X40 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
LRRC28Q86X40 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.38■□□□□ 0.53
LRRC28Q86X40 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC28Q86X40 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC28Q86X40 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC28Q86X40 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC28Q86X40 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC28Q86X40 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC28Q86X40 AC006128.1-201ENST00000624704 1661 ntBASIC18.38■□□□□ 0.53
LRRC28Q86X40 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC28Q86X40 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC28Q86X40 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC28Q86X40 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
LRRC28Q86X40 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC28Q86X40 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRC28Q86X40 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms