Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF546Q86UE3 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC17.26■□□□□ 0.35
ZNF546Q86UE3 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.26■□□□□ 0.35
ZNF546Q86UE3 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.26■□□□□ 0.35
ZNF546Q86UE3 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF546Q86UE3 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF546Q86UE3 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.26■□□□□ 0.35
ZNF546Q86UE3 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF546Q86UE3 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNF546Q86UE3 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.26■□□□□ 0.35
ZNF546Q86UE3 AP000974.1-201ENST00000623909 2387 ntBASIC17.25■□□□□ 0.35
ZNF546Q86UE3 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF546Q86UE3 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF546Q86UE3 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.25■□□□□ 0.35
ZNF546Q86UE3 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.25■□□□□ 0.35
ZNF546Q86UE3 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF546Q86UE3 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF546Q86UE3 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF546Q86UE3 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF546Q86UE3 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF546Q86UE3 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.25■□□□□ 0.35
ZNF546Q86UE3 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
ZNF546Q86UE3 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF546Q86UE3 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF546Q86UE3 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF546Q86UE3 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF546Q86UE3 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.25■□□□□ 0.35
ZNF546Q86UE3 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.25■□□□□ 0.35
ZNF546Q86UE3 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC17.25■□□□□ 0.35
ZNF546Q86UE3 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
ZNF546Q86UE3 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
ZNF546Q86UE3 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.25■□□□□ 0.35
ZNF546Q86UE3 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF546Q86UE3 AC004408.2-201ENST00000623613 2777 ntBASIC17.25■□□□□ 0.35
ZNF546Q86UE3 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF546Q86UE3 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.25■□□□□ 0.35
ZNF546Q86UE3 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
ZNF546Q86UE3 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF546Q86UE3 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF546Q86UE3 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNF546Q86UE3 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF546Q86UE3 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF546Q86UE3 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.24■□□□□ 0.35
ZNF546Q86UE3 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF546Q86UE3 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
ZNF546Q86UE3 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF546Q86UE3 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.24■□□□□ 0.35
ZNF546Q86UE3 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF546Q86UE3 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.24■□□□□ 0.35
ZNF546Q86UE3 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF546Q86UE3 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF546Q86UE3 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF546Q86UE3 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF546Q86UE3 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF546Q86UE3 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ZNF546Q86UE3 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
ZNF546Q86UE3 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.24■□□□□ 0.35
ZNF546Q86UE3 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF546Q86UE3 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF546Q86UE3 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
ZNF546Q86UE3 TNXA-203ENST00000507684 2038 ntBASIC17.23■□□□□ 0.35
ZNF546Q86UE3 AL162377.1-201ENST00000618844 1793 ntBASIC17.23■□□□□ 0.35
ZNF546Q86UE3 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF546Q86UE3 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
ZNF546Q86UE3 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF546Q86UE3 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
ZNF546Q86UE3 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.23■□□□□ 0.35
ZNF546Q86UE3 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.23■□□□□ 0.35
ZNF546Q86UE3 HSD17B1P1-201ENST00000590052 955 ntBASIC17.23■□□□□ 0.35
ZNF546Q86UE3 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF546Q86UE3 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.23■□□□□ 0.35
ZNF546Q86UE3 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF546Q86UE3 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF546Q86UE3 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF546Q86UE3 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF546Q86UE3 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.23■□□□□ 0.35
ZNF546Q86UE3 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ZNF546Q86UE3 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
ZNF546Q86UE3 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF546Q86UE3 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF546Q86UE3 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.23■□□□□ 0.35
ZNF546Q86UE3 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.23■□□□□ 0.35
ZNF546Q86UE3 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ZNF546Q86UE3 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
ZNF546Q86UE3 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
ZNF546Q86UE3 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF546Q86UE3 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF546Q86UE3 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.22■□□□□ 0.35
ZNF546Q86UE3 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
ZNF546Q86UE3 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF546Q86UE3 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF546Q86UE3 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF546Q86UE3 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
ZNF546Q86UE3 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
ZNF546Q86UE3 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
ZNF546Q86UE3 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC17.22■□□□□ 0.35
ZNF546Q86UE3 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ZNF546Q86UE3 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.22■□□□□ 0.35
ZNF546Q86UE3 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.22■□□□□ 0.35
ZNF546Q86UE3 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms