Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 DENND3-207ENST00000518347 850 ntTSL 2 BASIC13.66□□□□□ -0.22
SCXQ7RTU7 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC13.66□□□□□ -0.22
SCXQ7RTU7 AC104187.1-201ENST00000607510 612 ntBASIC13.66□□□□□ -0.22
SCXQ7RTU7 AC011767.1-201ENST00000617410 1153 ntBASIC13.66□□□□□ -0.22
SCXQ7RTU7 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC13.66□□□□□ -0.22
SCXQ7RTU7 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SCXQ7RTU7 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SCXQ7RTU7 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SCXQ7RTU7 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SCXQ7RTU7 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SCXQ7RTU7 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC13.66□□□□□ -0.22
SCXQ7RTU7 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SCXQ7RTU7 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SCXQ7RTU7 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC13.65□□□□□ -0.22
SCXQ7RTU7 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC13.65□□□□□ -0.22
SCXQ7RTU7 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
SCXQ7RTU7 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SCXQ7RTU7 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC13.65□□□□□ -0.22
SCXQ7RTU7 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SCXQ7RTU7 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
SCXQ7RTU7 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SCXQ7RTU7 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SCXQ7RTU7 METTL26-203ENST00000397664 604 ntTSL 2 BASIC13.65□□□□□ -0.22
SCXQ7RTU7 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC13.65□□□□□ -0.22
SCXQ7RTU7 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC13.65□□□□□ -0.22
SCXQ7RTU7 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC13.65□□□□□ -0.22
SCXQ7RTU7 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SCXQ7RTU7 PXK-203ENST00000383715 1756 ntTSL 5 BASIC13.65□□□□□ -0.22
SCXQ7RTU7 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC13.65□□□□□ -0.22
SCXQ7RTU7 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SCXQ7RTU7 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SCXQ7RTU7 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SCXQ7RTU7 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SCXQ7RTU7 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SCXQ7RTU7 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SCXQ7RTU7 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SCXQ7RTU7 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SCXQ7RTU7 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SCXQ7RTU7 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
SCXQ7RTU7 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
SCXQ7RTU7 AL391422.3-201ENST00000603791 2761 ntBASIC13.64□□□□□ -0.23
SCXQ7RTU7 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SCXQ7RTU7 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SCXQ7RTU7 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
SCXQ7RTU7 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SCXQ7RTU7 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SCXQ7RTU7 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC13.64□□□□□ -0.23
SCXQ7RTU7 PPP1R14BP3-201ENST00000509033 445 ntBASIC13.64□□□□□ -0.23
SCXQ7RTU7 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SCXQ7RTU7 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SCXQ7RTU7 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SCXQ7RTU7 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SCXQ7RTU7 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SCXQ7RTU7 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SCXQ7RTU7 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
SCXQ7RTU7 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SCXQ7RTU7 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SCXQ7RTU7 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SCXQ7RTU7 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC13.64□□□□□ -0.23
SCXQ7RTU7 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
SCXQ7RTU7 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SCXQ7RTU7 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SCXQ7RTU7 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SCXQ7RTU7 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SCXQ7RTU7 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SCXQ7RTU7 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SCXQ7RTU7 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SCXQ7RTU7 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SCXQ7RTU7 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SCXQ7RTU7 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC13.63□□□□□ -0.23
SCXQ7RTU7 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SCXQ7RTU7 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SCXQ7RTU7 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SCXQ7RTU7 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC13.63□□□□□ -0.23
SCXQ7RTU7 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC13.63□□□□□ -0.23
SCXQ7RTU7 MIR663A-201ENST00000385250 93 ntBASIC13.63□□□□□ -0.23
SCXQ7RTU7 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SCXQ7RTU7 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC13.63□□□□□ -0.23
SCXQ7RTU7 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC13.63□□□□□ -0.23
SCXQ7RTU7 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC13.63□□□□□ -0.23
SCXQ7RTU7 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC13.63□□□□□ -0.23
SCXQ7RTU7 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SCXQ7RTU7 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SCXQ7RTU7 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SCXQ7RTU7 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC13.63□□□□□ -0.23
SCXQ7RTU7 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SCXQ7RTU7 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SCXQ7RTU7 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SCXQ7RTU7 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC13.63□□□□□ -0.23
SCXQ7RTU7 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
SCXQ7RTU7 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SCXQ7RTU7 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC13.62□□□□□ -0.23
SCXQ7RTU7 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SCXQ7RTU7 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
SCXQ7RTU7 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SCXQ7RTU7 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SCXQ7RTU7 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SCXQ7RTU7 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC13.62□□□□□ -0.23
SCXQ7RTU7 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SCXQ7RTU7 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms