Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHMP1BQ7LBR1 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.07■□□□□ 0.64
CHMP1BQ7LBR1 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHMP1BQ7LBR1 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.07■□□□□ 0.64
CHMP1BQ7LBR1 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHMP1BQ7LBR1 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHMP1BQ7LBR1 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHMP1BQ7LBR1 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHMP1BQ7LBR1 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.07■□□□□ 0.64
CHMP1BQ7LBR1 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHMP1BQ7LBR1 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CHMP1BQ7LBR1 AP001160.3-201ENST00000601484 763 ntBASIC19.07■□□□□ 0.64
CHMP1BQ7LBR1 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.07■□□□□ 0.64
CHMP1BQ7LBR1 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CHMP1BQ7LBR1 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHMP1BQ7LBR1 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHMP1BQ7LBR1 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHMP1BQ7LBR1 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHMP1BQ7LBR1 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CHMP1BQ7LBR1 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CHMP1BQ7LBR1 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHMP1BQ7LBR1 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHMP1BQ7LBR1 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CHMP1BQ7LBR1 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.06■□□□□ 0.64
CHMP1BQ7LBR1 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.06■□□□□ 0.64
CHMP1BQ7LBR1 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.06■□□□□ 0.64
CHMP1BQ7LBR1 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CHMP1BQ7LBR1 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHMP1BQ7LBR1 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.06■□□□□ 0.64
CHMP1BQ7LBR1 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CHMP1BQ7LBR1 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.06■□□□□ 0.64
CHMP1BQ7LBR1 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
CHMP1BQ7LBR1 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.06■□□□□ 0.64
CHMP1BQ7LBR1 BID-214ENST00000617586 542 ntTSL 5 BASIC19.06■□□□□ 0.64
CHMP1BQ7LBR1 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.06■□□□□ 0.64
CHMP1BQ7LBR1 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHMP1BQ7LBR1 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CHMP1BQ7LBR1 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
CHMP1BQ7LBR1 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
CHMP1BQ7LBR1 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHMP1BQ7LBR1 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.06■□□□□ 0.64
CHMP1BQ7LBR1 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHMP1BQ7LBR1 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHMP1BQ7LBR1 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CHMP1BQ7LBR1 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP1BQ7LBR1 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.05■□□□□ 0.64
CHMP1BQ7LBR1 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
CHMP1BQ7LBR1 HCG11-201ENST00000411553 5696 ntBASIC19.05■□□□□ 0.64
CHMP1BQ7LBR1 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP1BQ7LBR1 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP1BQ7LBR1 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP1BQ7LBR1 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP1BQ7LBR1 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP1BQ7LBR1 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP1BQ7LBR1 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP1BQ7LBR1 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP1BQ7LBR1 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.05■□□□□ 0.64
CHMP1BQ7LBR1 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP1BQ7LBR1 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP1BQ7LBR1 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP1BQ7LBR1 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.05■□□□□ 0.64
CHMP1BQ7LBR1 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.05■□□□□ 0.64
CHMP1BQ7LBR1 KRT18P61-201ENST00000585825 1298 ntBASIC19.05■□□□□ 0.64
CHMP1BQ7LBR1 AC120498.10-201ENST00000621827 505 ntBASIC19.05■□□□□ 0.64
CHMP1BQ7LBR1 AC092437.1-201ENST00000624794 1048 ntBASIC19.05■□□□□ 0.64
CHMP1BQ7LBR1 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP1BQ7LBR1 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CHMP1BQ7LBR1 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP1BQ7LBR1 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP1BQ7LBR1 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP1BQ7LBR1 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP1BQ7LBR1 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP1BQ7LBR1 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.05■□□□□ 0.64
CHMP1BQ7LBR1 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.05■□□□□ 0.64
CHMP1BQ7LBR1 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CHMP1BQ7LBR1 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP1BQ7LBR1 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP1BQ7LBR1 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.04■□□□□ 0.64
CHMP1BQ7LBR1 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.04■□□□□ 0.64
CHMP1BQ7LBR1 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP1BQ7LBR1 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP1BQ7LBR1 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.04■□□□□ 0.64
CHMP1BQ7LBR1 AC006015.1-201ENST00000429970 570 ntBASIC19.04■□□□□ 0.64
CHMP1BQ7LBR1 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.04■□□□□ 0.64
CHMP1BQ7LBR1 AC138907.5-202ENST00000569484 235 ntBASIC19.04■□□□□ 0.64
CHMP1BQ7LBR1 AC053503.5-201ENST00000601508 636 ntBASIC19.04■□□□□ 0.64
CHMP1BQ7LBR1 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.04■□□□□ 0.64
CHMP1BQ7LBR1 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP1BQ7LBR1 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
CHMP1BQ7LBR1 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.04■□□□□ 0.64
CHMP1BQ7LBR1 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP1BQ7LBR1 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHMP1BQ7LBR1 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP1BQ7LBR1 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP1BQ7LBR1 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP1BQ7LBR1 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP1BQ7LBR1 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.03■□□□□ 0.64
CHMP1BQ7LBR1 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CHMP1BQ7LBR1 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHMP1BQ7LBR1 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms