Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
FOXR1Q6PIV2 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
FOXR1Q6PIV2 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
FOXR1Q6PIV2 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
FOXR1Q6PIV2 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
FOXR1Q6PIV2 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
FOXR1Q6PIV2 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
FOXR1Q6PIV2 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
FOXR1Q6PIV2 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
FOXR1Q6PIV2 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
FOXR1Q6PIV2 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
FOXR1Q6PIV2 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
FOXR1Q6PIV2 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
FOXR1Q6PIV2 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.54■■□□□ 1.04
FOXR1Q6PIV2 SLC47A1P1-202ENST00000449666 945 ntBASIC21.54■■□□□ 1.04
FOXR1Q6PIV2 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.54■■□□□ 1.04
FOXR1Q6PIV2 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
FOXR1Q6PIV2 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
FOXR1Q6PIV2 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
FOXR1Q6PIV2 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
FOXR1Q6PIV2 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
FOXR1Q6PIV2 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.54■■□□□ 1.04
FOXR1Q6PIV2 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
FOXR1Q6PIV2 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.54■■□□□ 1.04
FOXR1Q6PIV2 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
FOXR1Q6PIV2 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
FOXR1Q6PIV2 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
FOXR1Q6PIV2 GABARAPL3-202ENST00000624044 1851 ntBASIC21.54■■□□□ 1.04
FOXR1Q6PIV2 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.54■■□□□ 1.04
FOXR1Q6PIV2 AC073314.1-201ENST00000568729 2216 ntBASIC21.53■■□□□ 1.04
FOXR1Q6PIV2 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
FOXR1Q6PIV2 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
FOXR1Q6PIV2 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
FOXR1Q6PIV2 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
FOXR1Q6PIV2 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
FOXR1Q6PIV2 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC21.53■■□□□ 1.04
FOXR1Q6PIV2 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
FOXR1Q6PIV2 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
FOXR1Q6PIV2 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
FOXR1Q6PIV2 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
FOXR1Q6PIV2 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.53■■□□□ 1.04
FOXR1Q6PIV2 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.53■■□□□ 1.04
FOXR1Q6PIV2 KRT18P5-201ENST00000436075 1291 ntBASIC21.53■■□□□ 1.04
FOXR1Q6PIV2 YBX1P1-201ENST00000445822 960 ntBASIC21.53■■□□□ 1.04
FOXR1Q6PIV2 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.53■■□□□ 1.04
FOXR1Q6PIV2 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.53■■□□□ 1.04
FOXR1Q6PIV2 MIR6084-201ENST00000622012 110 ntBASIC21.53■■□□□ 1.04
FOXR1Q6PIV2 AP005212.1-201ENST00000581547 1997 ntBASIC21.53■■□□□ 1.04
FOXR1Q6PIV2 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
FOXR1Q6PIV2 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
FOXR1Q6PIV2 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.53■■□□□ 1.04
FOXR1Q6PIV2 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
FOXR1Q6PIV2 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
FOXR1Q6PIV2 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
FOXR1Q6PIV2 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.53■■□□□ 1.04
FOXR1Q6PIV2 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
FOXR1Q6PIV2 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC21.53■■□□□ 1.04
FOXR1Q6PIV2 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
FOXR1Q6PIV2 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
FOXR1Q6PIV2 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
FOXR1Q6PIV2 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
FOXR1Q6PIV2 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.52■■□□□ 1.04
FOXR1Q6PIV2 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
FOXR1Q6PIV2 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
FOXR1Q6PIV2 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
FOXR1Q6PIV2 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.52■■□□□ 1.04
FOXR1Q6PIV2 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
FOXR1Q6PIV2 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.52■■□□□ 1.04
FOXR1Q6PIV2 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
FOXR1Q6PIV2 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
FOXR1Q6PIV2 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
FOXR1Q6PIV2 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.52■■□□□ 1.04
FOXR1Q6PIV2 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.52■■□□□ 1.04
FOXR1Q6PIV2 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
FOXR1Q6PIV2 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
FOXR1Q6PIV2 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
FOXR1Q6PIV2 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.52■■□□□ 1.03
FOXR1Q6PIV2 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
FOXR1Q6PIV2 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
FOXR1Q6PIV2 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.51■■□□□ 1.03
FOXR1Q6PIV2 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC21.51■■□□□ 1.03
FOXR1Q6PIV2 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
FOXR1Q6PIV2 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.51■■□□□ 1.03
FOXR1Q6PIV2 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
FOXR1Q6PIV2 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
FOXR1Q6PIV2 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
FOXR1Q6PIV2 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
FOXR1Q6PIV2 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
FOXR1Q6PIV2 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC21.51■■□□□ 1.03
FOXR1Q6PIV2 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.51■■□□□ 1.03
FOXR1Q6PIV2 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
FOXR1Q6PIV2 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
FOXR1Q6PIV2 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.51■■□□□ 1.03
FOXR1Q6PIV2 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.51■■□□□ 1.03
FOXR1Q6PIV2 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
FOXR1Q6PIV2 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
FOXR1Q6PIV2 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
FOXR1Q6PIV2 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
FOXR1Q6PIV2 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.51■■□□□ 1.03
FOXR1Q6PIV2 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms