Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
NIPAL3Q6P499 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.89■□□□□ 0.61
NIPAL3Q6P499 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.89■□□□□ 0.61
NIPAL3Q6P499 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NIPAL3Q6P499 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
NIPAL3Q6P499 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NIPAL3Q6P499 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.89■□□□□ 0.61
NIPAL3Q6P499 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
NIPAL3Q6P499 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
NIPAL3Q6P499 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
NIPAL3Q6P499 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
NIPAL3Q6P499 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NIPAL3Q6P499 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NIPAL3Q6P499 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
NIPAL3Q6P499 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
NIPAL3Q6P499 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NIPAL3Q6P499 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NIPAL3Q6P499 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NIPAL3Q6P499 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NIPAL3Q6P499 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
NIPAL3Q6P499 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
NIPAL3Q6P499 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NIPAL3Q6P499 AC079140.4-201ENST00000507448 529 ntBASIC18.88■□□□□ 0.61
NIPAL3Q6P499 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.88■□□□□ 0.61
NIPAL3Q6P499 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NIPAL3Q6P499 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
NIPAL3Q6P499 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NIPAL3Q6P499 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NIPAL3Q6P499 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NIPAL3Q6P499 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NIPAL3Q6P499 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.88■□□□□ 0.61
NIPAL3Q6P499 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NIPAL3Q6P499 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NIPAL3Q6P499 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NIPAL3Q6P499 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NIPAL3Q6P499 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NIPAL3Q6P499 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
NIPAL3Q6P499 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
NIPAL3Q6P499 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NIPAL3Q6P499 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NIPAL3Q6P499 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.87■□□□□ 0.61
NIPAL3Q6P499 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.87■□□□□ 0.61
NIPAL3Q6P499 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
NIPAL3Q6P499 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NIPAL3Q6P499 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NIPAL3Q6P499 CCDC92B-201ENST00000575506 885 ntBASIC18.87■□□□□ 0.61
NIPAL3Q6P499 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.87■□□□□ 0.61
NIPAL3Q6P499 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
NIPAL3Q6P499 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NIPAL3Q6P499 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NIPAL3Q6P499 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NIPAL3Q6P499 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.86■□□□□ 0.61
NIPAL3Q6P499 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.86■□□□□ 0.61
NIPAL3Q6P499 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NIPAL3Q6P499 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NIPAL3Q6P499 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.86■□□□□ 0.61
NIPAL3Q6P499 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NIPAL3Q6P499 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NIPAL3Q6P499 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NIPAL3Q6P499 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.86■□□□□ 0.61
NIPAL3Q6P499 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NIPAL3Q6P499 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.86■□□□□ 0.61
NIPAL3Q6P499 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.86■□□□□ 0.61
NIPAL3Q6P499 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.86■□□□□ 0.61
NIPAL3Q6P499 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.86■□□□□ 0.61
NIPAL3Q6P499 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NIPAL3Q6P499 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NIPAL3Q6P499 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.86■□□□□ 0.61
NIPAL3Q6P499 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NIPAL3Q6P499 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
NIPAL3Q6P499 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
NIPAL3Q6P499 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NIPAL3Q6P499 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NIPAL3Q6P499 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.85■□□□□ 0.61
NIPAL3Q6P499 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NIPAL3Q6P499 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.85■□□□□ 0.61
NIPAL3Q6P499 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NIPAL3Q6P499 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.85■□□□□ 0.61
NIPAL3Q6P499 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.85■□□□□ 0.61
NIPAL3Q6P499 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NIPAL3Q6P499 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.85■□□□□ 0.61
NIPAL3Q6P499 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.85■□□□□ 0.61
NIPAL3Q6P499 KRT18P14-201ENST00000534205 1250 ntBASIC18.85■□□□□ 0.61
NIPAL3Q6P499 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.85■□□□□ 0.61
NIPAL3Q6P499 TERF1P2-201ENST00000583350 1212 ntBASIC18.85■□□□□ 0.61
NIPAL3Q6P499 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.85■□□□□ 0.61
NIPAL3Q6P499 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NIPAL3Q6P499 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.85■□□□□ 0.61
NIPAL3Q6P499 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NIPAL3Q6P499 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NIPAL3Q6P499 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NIPAL3Q6P499 AC006128.1-201ENST00000624704 1661 ntBASIC18.85■□□□□ 0.61
NIPAL3Q6P499 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.85■□□□□ 0.61
NIPAL3Q6P499 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NIPAL3Q6P499 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NIPAL3Q6P499 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NIPAL3Q6P499 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NIPAL3Q6P499 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NIPAL3Q6P499 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
NIPAL3Q6P499 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms