Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
RNF213Q63HN8 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC11.27□□□□□ -0.61
RNF213Q63HN8 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC11.27□□□□□ -0.61
RNF213Q63HN8 FITM1-202ENST00000559294 800 ntBASIC11.27□□□□□ -0.61
RNF213Q63HN8 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC11.27□□□□□ -0.61
RNF213Q63HN8 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
RNF213Q63HN8 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RNF213Q63HN8 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
RNF213Q63HN8 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
RNF213Q63HN8 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RNF213Q63HN8 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RNF213Q63HN8 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC11.27□□□□□ -0.61
RNF213Q63HN8 AC063952.2-201ENST00000498792 1227 ntBASIC11.27□□□□□ -0.61
RNF213Q63HN8 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC11.27□□□□□ -0.61
RNF213Q63HN8 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC11.27□□□□□ -0.61
RNF213Q63HN8 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC11.27□□□□□ -0.61
RNF213Q63HN8 IRF5-214ENST00000613821 595 ntTSL 5 BASIC11.27□□□□□ -0.61
RNF213Q63HN8 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RNF213Q63HN8 CRK-204ENST00000574295 1391 ntTSL 5 BASIC11.27□□□□□ -0.61
RNF213Q63HN8 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
RNF213Q63HN8 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RNF213Q63HN8 KRT8P45-201ENST00000414328 1447 ntBASIC11.27□□□□□ -0.61
RNF213Q63HN8 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RNF213Q63HN8 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RNF213Q63HN8 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RNF213Q63HN8 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC11.26□□□□□ -0.61
RNF213Q63HN8 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
RNF213Q63HN8 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC11.26□□□□□ -0.61
RNF213Q63HN8 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC11.26□□□□□ -0.61
RNF213Q63HN8 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC11.26□□□□□ -0.61
RNF213Q63HN8 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RNF213Q63HN8 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RNF213Q63HN8 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
RNF213Q63HN8 RPS15-203ENST00000586096 570 ntTSL 2 BASIC11.26□□□□□ -0.61
RNF213Q63HN8 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC11.26□□□□□ -0.61
RNF213Q63HN8 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RNF213Q63HN8 LGALS8-AS1-201ENST00000487567 1457 ntBASIC11.26□□□□□ -0.61
RNF213Q63HN8 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RNF213Q63HN8 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC11.26□□□□□ -0.61
RNF213Q63HN8 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC11.26□□□□□ -0.61
RNF213Q63HN8 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RNF213Q63HN8 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC11.26□□□□□ -0.61
RNF213Q63HN8 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC11.26□□□□□ -0.61
RNF213Q63HN8 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
RNF213Q63HN8 AL390955.1-201ENST00000428694 934 ntBASIC11.25□□□□□ -0.61
RNF213Q63HN8 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
RNF213Q63HN8 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC11.25□□□□□ -0.61
RNF213Q63HN8 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC11.25□□□□□ -0.61
RNF213Q63HN8 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
RNF213Q63HN8 AC079630.1-202ENST00000618127 1840 ntBASIC11.25□□□□□ -0.61
RNF213Q63HN8 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC11.25□□□□□ -0.61
RNF213Q63HN8 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC11.25□□□□□ -0.61
RNF213Q63HN8 AC010203.1-204ENST00000548782 407 ntBASIC11.25□□□□□ -0.61
RNF213Q63HN8 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
RNF213Q63HN8 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC11.25□□□□□ -0.61
RNF213Q63HN8 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RNF213Q63HN8 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC11.25□□□□□ -0.61
RNF213Q63HN8 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
RNF213Q63HN8 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC11.25□□□□□ -0.61
RNF213Q63HN8 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RNF213Q63HN8 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
RNF213Q63HN8 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
RNF213Q63HN8 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RNF213Q63HN8 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RNF213Q63HN8 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RNF213Q63HN8 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
RNF213Q63HN8 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC11.25□□□□□ -0.61
RNF213Q63HN8 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
RNF213Q63HN8 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
RNF213Q63HN8 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
RNF213Q63HN8 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
RNF213Q63HN8 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RNF213Q63HN8 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RNF213Q63HN8 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RNF213Q63HN8 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC11.24□□□□□ -0.61
RNF213Q63HN8 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC11.24□□□□□ -0.61
RNF213Q63HN8 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC11.24□□□□□ -0.61
RNF213Q63HN8 AC128688.1-201ENST00000487626 519 ntBASIC11.24□□□□□ -0.61
RNF213Q63HN8 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC11.24□□□□□ -0.61
RNF213Q63HN8 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RNF213Q63HN8 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC11.24□□□□□ -0.61
RNF213Q63HN8 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RNF213Q63HN8 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
RNF213Q63HN8 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC11.24□□□□□ -0.61
RNF213Q63HN8 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC11.24□□□□□ -0.61
RNF213Q63HN8 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RNF213Q63HN8 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC11.24□□□□□ -0.61
RNF213Q63HN8 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC11.24□□□□□ -0.61
RNF213Q63HN8 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RNF213Q63HN8 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RNF213Q63HN8 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RNF213Q63HN8 FXN-202ENST00000396364 980 ntTSL 5 BASIC11.24□□□□□ -0.61
RNF213Q63HN8 KRASP1-201ENST00000407852 552 ntBASIC11.24□□□□□ -0.61
RNF213Q63HN8 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RNF213Q63HN8 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC11.24□□□□□ -0.61
RNF213Q63HN8 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RNF213Q63HN8 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
RNF213Q63HN8 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
RNF213Q63HN8 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
RNF213Q63HN8 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms