Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRIF1Q5T3J3 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRIF1Q5T3J3 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRIF1Q5T3J3 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
LRIF1Q5T3J3 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRIF1Q5T3J3 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRIF1Q5T3J3 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LRIF1Q5T3J3 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.61■□□□□ 0.73
LRIF1Q5T3J3 AC027682.1-201ENST00000562846 899 ntBASIC19.61■□□□□ 0.73
LRIF1Q5T3J3 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
LRIF1Q5T3J3 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.61■□□□□ 0.73
LRIF1Q5T3J3 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRIF1Q5T3J3 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.61■□□□□ 0.73
LRIF1Q5T3J3 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRIF1Q5T3J3 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
LRIF1Q5T3J3 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.61■□□□□ 0.73
LRIF1Q5T3J3 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LRIF1Q5T3J3 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.61■□□□□ 0.73
LRIF1Q5T3J3 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LRIF1Q5T3J3 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRIF1Q5T3J3 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LRIF1Q5T3J3 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRIF1Q5T3J3 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRIF1Q5T3J3 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRIF1Q5T3J3 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRIF1Q5T3J3 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRIF1Q5T3J3 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LRIF1Q5T3J3 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRIF1Q5T3J3 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LRIF1Q5T3J3 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.6■□□□□ 0.73
LRIF1Q5T3J3 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.6■□□□□ 0.73
LRIF1Q5T3J3 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.6■□□□□ 0.73
LRIF1Q5T3J3 AC053503.5-201ENST00000601508 636 ntBASIC19.6■□□□□ 0.73
LRIF1Q5T3J3 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRIF1Q5T3J3 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LRIF1Q5T3J3 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.6■□□□□ 0.73
LRIF1Q5T3J3 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LRIF1Q5T3J3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.59■□□□□ 0.73
LRIF1Q5T3J3 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
LRIF1Q5T3J3 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.59■□□□□ 0.73
LRIF1Q5T3J3 AC011484.1-201ENST00000377652 1995 ntBASIC19.59■□□□□ 0.73
LRIF1Q5T3J3 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.59■□□□□ 0.73
LRIF1Q5T3J3 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRIF1Q5T3J3 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
LRIF1Q5T3J3 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
LRIF1Q5T3J3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRIF1Q5T3J3 MIR572-201ENST00000384983 95 ntBASIC19.59■□□□□ 0.73
LRIF1Q5T3J3 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.59■□□□□ 0.73
LRIF1Q5T3J3 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LRIF1Q5T3J3 AL121603.2-201ENST00000557373 2117 ntBASIC19.59■□□□□ 0.73
LRIF1Q5T3J3 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LRIF1Q5T3J3 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LRIF1Q5T3J3 AL162377.1-201ENST00000618844 1793 ntBASIC19.59■□□□□ 0.73
LRIF1Q5T3J3 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.59■□□□□ 0.73
LRIF1Q5T3J3 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.58■□□□□ 0.73
LRIF1Q5T3J3 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.58■□□□□ 0.73
LRIF1Q5T3J3 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LRIF1Q5T3J3 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.58■□□□□ 0.73
LRIF1Q5T3J3 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LRIF1Q5T3J3 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRIF1Q5T3J3 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LRIF1Q5T3J3 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRIF1Q5T3J3 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRIF1Q5T3J3 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRIF1Q5T3J3 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRIF1Q5T3J3 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
LRIF1Q5T3J3 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.57■□□□□ 0.72
LRIF1Q5T3J3 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.57■□□□□ 0.72
LRIF1Q5T3J3 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRIF1Q5T3J3 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.57■□□□□ 0.72
LRIF1Q5T3J3 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
LRIF1Q5T3J3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.57■□□□□ 0.72
LRIF1Q5T3J3 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRIF1Q5T3J3 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
LRIF1Q5T3J3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRIF1Q5T3J3 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LRIF1Q5T3J3 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.57■□□□□ 0.72
LRIF1Q5T3J3 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRIF1Q5T3J3 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRIF1Q5T3J3 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRIF1Q5T3J3 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.57■□□□□ 0.72
LRIF1Q5T3J3 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
LRIF1Q5T3J3 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LRIF1Q5T3J3 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRIF1Q5T3J3 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.56■□□□□ 0.72
LRIF1Q5T3J3 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRIF1Q5T3J3 FP700111.2-201ENST00000619190 1892 ntBASIC19.56■□□□□ 0.72
LRIF1Q5T3J3 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRIF1Q5T3J3 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRIF1Q5T3J3 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.56■□□□□ 0.72
LRIF1Q5T3J3 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRIF1Q5T3J3 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.56■□□□□ 0.72
LRIF1Q5T3J3 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRIF1Q5T3J3 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
LRIF1Q5T3J3 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LRIF1Q5T3J3 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
LRIF1Q5T3J3 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.56■□□□□ 0.72
LRIF1Q5T3J3 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
LRIF1Q5T3J3 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.55■□□□□ 0.72
LRIF1Q5T3J3 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms