Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC23.92■■□□□ 1.42
USH1GQ495M9 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
USH1GQ495M9 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
USH1GQ495M9 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.92■■□□□ 1.42
USH1GQ495M9 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
USH1GQ495M9 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
USH1GQ495M9 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC23.91■■□□□ 1.42
USH1GQ495M9 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
USH1GQ495M9 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
USH1GQ495M9 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
USH1GQ495M9 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC23.91■■□□□ 1.42
USH1GQ495M9 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
USH1GQ495M9 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
USH1GQ495M9 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
USH1GQ495M9 DYM-203ENST00000442713 2147 ntTSL 2 BASIC23.91■■□□□ 1.42
USH1GQ495M9 ISCU-212ENST00000547005 795 ntTSL 3 BASIC23.91■■□□□ 1.42
USH1GQ495M9 RGMA-211ENST00000557420 989 ntTSL 3 BASIC23.91■■□□□ 1.42
USH1GQ495M9 MIR4758-201ENST00000577688 71 ntBASIC23.91■■□□□ 1.42
USH1GQ495M9 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC23.91■■□□□ 1.42
USH1GQ495M9 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC23.91■■□□□ 1.42
USH1GQ495M9 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
USH1GQ495M9 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
USH1GQ495M9 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC23.91■■□□□ 1.42
USH1GQ495M9 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC23.91■■□□□ 1.42
USH1GQ495M9 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
USH1GQ495M9 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC23.9■■□□□ 1.42
USH1GQ495M9 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
USH1GQ495M9 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC23.9■■□□□ 1.42
USH1GQ495M9 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC23.9■■□□□ 1.42
USH1GQ495M9 PPP1R14BP2-201ENST00000426284 444 ntBASIC23.9■■□□□ 1.42
USH1GQ495M9 CDV3P1-201ENST00000471403 739 ntBASIC23.9■■□□□ 1.42
USH1GQ495M9 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
USH1GQ495M9 CASP6-205ENST00000505486 538 ntTSL 4 BASIC23.9■■□□□ 1.42
USH1GQ495M9 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC23.9■■□□□ 1.42
USH1GQ495M9 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
USH1GQ495M9 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
USH1GQ495M9 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
USH1GQ495M9 PALM-207ENST00000590161 2137 ntTSL 4 BASIC23.9■■□□□ 1.42
USH1GQ495M9 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
USH1GQ495M9 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC23.9■■□□□ 1.42
USH1GQ495M9 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
USH1GQ495M9 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
USH1GQ495M9 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
USH1GQ495M9 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC23.89■■□□□ 1.42
USH1GQ495M9 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
USH1GQ495M9 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC23.89■■□□□ 1.42
USH1GQ495M9 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
USH1GQ495M9 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC23.89■■□□□ 1.42
USH1GQ495M9 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
USH1GQ495M9 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
USH1GQ495M9 PTPA-214ENST00000423100 988 ntTSL 2 BASIC23.89■■□□□ 1.41
USH1GQ495M9 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC23.89■■□□□ 1.41
USH1GQ495M9 CD99P1-205ENST00000527459 561 ntBASIC23.89■■□□□ 1.41
USH1GQ495M9 KRT18P6-201ENST00000555540 1265 ntBASIC23.89■■□□□ 1.41
USH1GQ495M9 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC23.89■■□□□ 1.41
USH1GQ495M9 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
USH1GQ495M9 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
USH1GQ495M9 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
USH1GQ495M9 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC23.89■■□□□ 1.41
USH1GQ495M9 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
USH1GQ495M9 TUB-203ENST00000534099 1759 ntTSL 2 BASIC23.88■■□□□ 1.41
USH1GQ495M9 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
USH1GQ495M9 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
USH1GQ495M9 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
USH1GQ495M9 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
USH1GQ495M9 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
USH1GQ495M9 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
USH1GQ495M9 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
USH1GQ495M9 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC23.88■■□□□ 1.41
USH1GQ495M9 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
USH1GQ495M9 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
USH1GQ495M9 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC23.88■■□□□ 1.41
USH1GQ495M9 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
USH1GQ495M9 FAM21FP-204ENST00000608637 956 ntBASIC23.88■■□□□ 1.41
USH1GQ495M9 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
USH1GQ495M9 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC23.88■■□□□ 1.41
USH1GQ495M9 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
USH1GQ495M9 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
USH1GQ495M9 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC23.87■■□□□ 1.41
USH1GQ495M9 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
USH1GQ495M9 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC23.87■■□□□ 1.41
USH1GQ495M9 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
USH1GQ495M9 AL355472.2-201ENST00000422958 438 ntBASIC23.87■■□□□ 1.41
USH1GQ495M9 AC073210.2-201ENST00000430369 194 ntBASIC23.87■■□□□ 1.41
USH1GQ495M9 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC23.87■■□□□ 1.41
USH1GQ495M9 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
USH1GQ495M9 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC23.87■■□□□ 1.41
USH1GQ495M9 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
USH1GQ495M9 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.87■■□□□ 1.41
USH1GQ495M9 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
USH1GQ495M9 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC23.87■■□□□ 1.41
USH1GQ495M9 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
USH1GQ495M9 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC23.86■■□□□ 1.41
USH1GQ495M9 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC23.86■■□□□ 1.41
USH1GQ495M9 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
USH1GQ495M9 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC23.86■■□□□ 1.41
USH1GQ495M9 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
USH1GQ495M9 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
USH1GQ495M9 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.86■■□□□ 1.41
USH1GQ495M9 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC23.86■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms