Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SHROOM1Q2M3G4 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC24.41■■□□□ 1.5
SHROOM1Q2M3G4 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SHROOM1Q2M3G4 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SHROOM1Q2M3G4 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC24.41■■□□□ 1.5
SHROOM1Q2M3G4 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SHROOM1Q2M3G4 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SHROOM1Q2M3G4 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
SHROOM1Q2M3G4 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC24.4■■□□□ 1.5
SHROOM1Q2M3G4 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC24.4■■□□□ 1.5
SHROOM1Q2M3G4 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC24.4■■□□□ 1.5
SHROOM1Q2M3G4 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
SHROOM1Q2M3G4 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
SHROOM1Q2M3G4 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SHROOM1Q2M3G4 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC24.4■■□□□ 1.5
SHROOM1Q2M3G4 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SHROOM1Q2M3G4 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC24.4■■□□□ 1.5
SHROOM1Q2M3G4 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC24.4■■□□□ 1.5
SHROOM1Q2M3G4 PTPA-214ENST00000423100 988 ntTSL 2 BASIC24.4■■□□□ 1.5
SHROOM1Q2M3G4 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC24.4■■□□□ 1.5
SHROOM1Q2M3G4 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SHROOM1Q2M3G4 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC24.4■■□□□ 1.5
SHROOM1Q2M3G4 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC24.4■■□□□ 1.5
SHROOM1Q2M3G4 AC006058.3-201ENST00000606217 1069 ntBASIC24.4■■□□□ 1.5
SHROOM1Q2M3G4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SHROOM1Q2M3G4 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
SHROOM1Q2M3G4 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
SHROOM1Q2M3G4 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC24.4■■□□□ 1.5
SHROOM1Q2M3G4 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC24.4■■□□□ 1.5
SHROOM1Q2M3G4 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SHROOM1Q2M3G4 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC24.4■■□□□ 1.5
SHROOM1Q2M3G4 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
SHROOM1Q2M3G4 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SHROOM1Q2M3G4 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SHROOM1Q2M3G4 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC24.39■■□□□ 1.5
SHROOM1Q2M3G4 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
SHROOM1Q2M3G4 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SHROOM1Q2M3G4 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SHROOM1Q2M3G4 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC24.39■■□□□ 1.49
SHROOM1Q2M3G4 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC24.39■■□□□ 1.49
SHROOM1Q2M3G4 UNC93B5-201ENST00000530315 699 ntBASIC24.39■■□□□ 1.49
SHROOM1Q2M3G4 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
SHROOM1Q2M3G4 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SHROOM1Q2M3G4 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SHROOM1Q2M3G4 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC24.39■■□□□ 1.49
SHROOM1Q2M3G4 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
SHROOM1Q2M3G4 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
SHROOM1Q2M3G4 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SHROOM1Q2M3G4 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SHROOM1Q2M3G4 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SHROOM1Q2M3G4 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SHROOM1Q2M3G4 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
SHROOM1Q2M3G4 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
SHROOM1Q2M3G4 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SHROOM1Q2M3G4 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
SHROOM1Q2M3G4 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC24.38■■□□□ 1.49
SHROOM1Q2M3G4 LSR-203ENST00000360798 1963 ntTSL 2 BASIC24.38■■□□□ 1.49
SHROOM1Q2M3G4 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
SHROOM1Q2M3G4 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SHROOM1Q2M3G4 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
SHROOM1Q2M3G4 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SHROOM1Q2M3G4 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC24.37■■□□□ 1.49
SHROOM1Q2M3G4 NME6-213ENST00000451657 871 ntTSL 2 BASIC24.37■■□□□ 1.49
SHROOM1Q2M3G4 AC128676.1-201ENST00000454392 318 ntBASIC24.37■■□□□ 1.49
SHROOM1Q2M3G4 CDV3P1-201ENST00000471403 739 ntBASIC24.37■■□□□ 1.49
SHROOM1Q2M3G4 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SHROOM1Q2M3G4 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC24.37■■□□□ 1.49
SHROOM1Q2M3G4 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SHROOM1Q2M3G4 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SHROOM1Q2M3G4 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
SHROOM1Q2M3G4 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SHROOM1Q2M3G4 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC24.36■■□□□ 1.49
SHROOM1Q2M3G4 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SHROOM1Q2M3G4 GCSHP5-201ENST00000443090 522 ntBASIC24.36■■□□□ 1.49
SHROOM1Q2M3G4 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC24.36■■□□□ 1.49
SHROOM1Q2M3G4 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
SHROOM1Q2M3G4 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
SHROOM1Q2M3G4 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
SHROOM1Q2M3G4 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
SHROOM1Q2M3G4 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
SHROOM1Q2M3G4 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
SHROOM1Q2M3G4 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SHROOM1Q2M3G4 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
SHROOM1Q2M3G4 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
SHROOM1Q2M3G4 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC24.35■■□□□ 1.49
SHROOM1Q2M3G4 AC008403.3-201ENST00000598924 454 ntBASIC24.35■■□□□ 1.49
SHROOM1Q2M3G4 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SHROOM1Q2M3G4 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SHROOM1Q2M3G4 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SHROOM1Q2M3G4 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SHROOM1Q2M3G4 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC24.34■■□□□ 1.49
SHROOM1Q2M3G4 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SHROOM1Q2M3G4 GCK-205ENST00000437084 1385 ntTSL 5 BASIC24.34■■□□□ 1.49
SHROOM1Q2M3G4 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SHROOM1Q2M3G4 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SHROOM1Q2M3G4 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SHROOM1Q2M3G4 MCRIP2P1-201ENST00000394346 511 ntBASIC24.34■■□□□ 1.49
SHROOM1Q2M3G4 AC007322.3-201ENST00000426526 701 ntBASIC24.34■■□□□ 1.49
SHROOM1Q2M3G4 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC24.34■■□□□ 1.49
SHROOM1Q2M3G4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms