Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
EFNB3Q15768 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
EFNB3Q15768 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.76■□□□□ 0.43
EFNB3Q15768 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
EFNB3Q15768 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.75■□□□□ 0.43
EFNB3Q15768 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
EFNB3Q15768 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
EFNB3Q15768 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
EFNB3Q15768 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.75■□□□□ 0.43
EFNB3Q15768 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.75■□□□□ 0.43
EFNB3Q15768 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.75■□□□□ 0.43
EFNB3Q15768 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.75■□□□□ 0.43
EFNB3Q15768 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
EFNB3Q15768 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
EFNB3Q15768 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.75■□□□□ 0.43
EFNB3Q15768 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.75■□□□□ 0.43
EFNB3Q15768 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.75■□□□□ 0.43
EFNB3Q15768 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.74■□□□□ 0.43
EFNB3Q15768 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
EFNB3Q15768 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
EFNB3Q15768 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
EFNB3Q15768 AC010980.2-201ENST00000587099 1412 ntBASIC17.74■□□□□ 0.43
EFNB3Q15768 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
EFNB3Q15768 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.74■□□□□ 0.43
EFNB3Q15768 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
EFNB3Q15768 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
EFNB3Q15768 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.74■□□□□ 0.43
EFNB3Q15768 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.74■□□□□ 0.43
EFNB3Q15768 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.74■□□□□ 0.43
EFNB3Q15768 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
EFNB3Q15768 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
EFNB3Q15768 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
EFNB3Q15768 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
EFNB3Q15768 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
EFNB3Q15768 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.73■□□□□ 0.43
EFNB3Q15768 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.73■□□□□ 0.43
EFNB3Q15768 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
EFNB3Q15768 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
EFNB3Q15768 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
EFNB3Q15768 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
EFNB3Q15768 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
EFNB3Q15768 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
EFNB3Q15768 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
EFNB3Q15768 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.73■□□□□ 0.43
EFNB3Q15768 AC100791.3-201ENST00000617619 330 ntBASIC17.73■□□□□ 0.43
EFNB3Q15768 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
EFNB3Q15768 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
EFNB3Q15768 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.73■□□□□ 0.43
EFNB3Q15768 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
EFNB3Q15768 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
EFNB3Q15768 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
EFNB3Q15768 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
EFNB3Q15768 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
EFNB3Q15768 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
EFNB3Q15768 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
EFNB3Q15768 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
EFNB3Q15768 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
EFNB3Q15768 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
EFNB3Q15768 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.72■□□□□ 0.43
EFNB3Q15768 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
EFNB3Q15768 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
EFNB3Q15768 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.72■□□□□ 0.43
EFNB3Q15768 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.72■□□□□ 0.43
EFNB3Q15768 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.72■□□□□ 0.43
EFNB3Q15768 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.72■□□□□ 0.43
EFNB3Q15768 KRT18P6-201ENST00000555540 1265 ntBASIC17.72■□□□□ 0.43
EFNB3Q15768 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.72■□□□□ 0.43
EFNB3Q15768 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.72■□□□□ 0.43
EFNB3Q15768 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.72■□□□□ 0.43
EFNB3Q15768 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EFNB3Q15768 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
EFNB3Q15768 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.72■□□□□ 0.43
EFNB3Q15768 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EFNB3Q15768 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
EFNB3Q15768 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
EFNB3Q15768 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
EFNB3Q15768 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
EFNB3Q15768 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
EFNB3Q15768 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EFNB3Q15768 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
EFNB3Q15768 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
EFNB3Q15768 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EFNB3Q15768 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
EFNB3Q15768 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
EFNB3Q15768 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.71■□□□□ 0.43
EFNB3Q15768 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.71■□□□□ 0.43
EFNB3Q15768 BX276092.2-201ENST00000417668 665 ntBASIC17.71■□□□□ 0.43
EFNB3Q15768 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.71■□□□□ 0.43
EFNB3Q15768 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.71■□□□□ 0.43
EFNB3Q15768 CD99P1-205ENST00000527459 561 ntBASIC17.71■□□□□ 0.43
EFNB3Q15768 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
EFNB3Q15768 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.71■□□□□ 0.43
EFNB3Q15768 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.71■□□□□ 0.43
EFNB3Q15768 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EFNB3Q15768 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.71■□□□□ 0.43
EFNB3Q15768 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
EFNB3Q15768 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
EFNB3Q15768 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
EFNB3Q15768 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
EFNB3Q15768 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms