Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCNA1P78396 AC068473.5-201ENST00000616428 2072 ntBASIC23.77■■□□□ 1.4
CCNA1P78396 CYP21A1P-202ENST00000354927 1481 ntBASIC23.77■■□□□ 1.4
CCNA1P78396 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
CCNA1P78396 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
CCNA1P78396 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCNA1P78396 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
CCNA1P78396 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC23.77■■□□□ 1.4
CCNA1P78396 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCNA1P78396 SOX15-203ENST00000570788 1093 ntBASIC23.77■■□□□ 1.4
CCNA1P78396 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC23.77■■□□□ 1.4
CCNA1P78396 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC23.77■■□□□ 1.4
CCNA1P78396 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC23.77■■□□□ 1.4
CCNA1P78396 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC23.77■■□□□ 1.4
CCNA1P78396 AC080038.3-201ENST00000623346 1952 ntBASIC23.77■■□□□ 1.4
CCNA1P78396 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCNA1P78396 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC23.77■■□□□ 1.4
CCNA1P78396 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
CCNA1P78396 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC23.76■■□□□ 1.39
CCNA1P78396 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCNA1P78396 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CCNA1P78396 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC23.76■■□□□ 1.39
CCNA1P78396 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC23.76■■□□□ 1.39
CCNA1P78396 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC23.76■■□□□ 1.39
CCNA1P78396 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC23.76■■□□□ 1.39
CCNA1P78396 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC23.76■■□□□ 1.39
CCNA1P78396 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCNA1P78396 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCNA1P78396 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CCNA1P78396 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC23.75■■□□□ 1.39
CCNA1P78396 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCNA1P78396 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CCNA1P78396 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CCNA1P78396 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.75■■□□□ 1.39
CCNA1P78396 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCNA1P78396 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCNA1P78396 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CCNA1P78396 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC23.75■■□□□ 1.39
CCNA1P78396 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC23.75■■□□□ 1.39
CCNA1P78396 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC23.75■■□□□ 1.39
CCNA1P78396 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC23.75■■□□□ 1.39
CCNA1P78396 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC23.75■■□□□ 1.39
CCNA1P78396 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC23.75■■□□□ 1.39
CCNA1P78396 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC23.75■■□□□ 1.39
CCNA1P78396 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCNA1P78396 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCNA1P78396 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
CCNA1P78396 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC23.74■■□□□ 1.39
CCNA1P78396 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCNA1P78396 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC23.74■■□□□ 1.39
CCNA1P78396 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCNA1P78396 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCNA1P78396 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCNA1P78396 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.74■■□□□ 1.39
CCNA1P78396 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCNA1P78396 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCNA1P78396 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCNA1P78396 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC23.74■■□□□ 1.39
CCNA1P78396 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CCNA1P78396 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC23.74■■□□□ 1.39
CCNA1P78396 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC23.74■■□□□ 1.39
CCNA1P78396 AC105020.6-201ENST00000621523 1217 ntBASIC23.74■■□□□ 1.39
CCNA1P78396 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC23.74■■□□□ 1.39
CCNA1P78396 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC23.74■■□□□ 1.39
CCNA1P78396 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCNA1P78396 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CCNA1P78396 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCNA1P78396 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCNA1P78396 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC23.74■■□□□ 1.39
CCNA1P78396 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CCNA1P78396 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCNA1P78396 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CCNA1P78396 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CCNA1P78396 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CCNA1P78396 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC23.73■■□□□ 1.39
CCNA1P78396 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC23.73■■□□□ 1.39
CCNA1P78396 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CCNA1P78396 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CCNA1P78396 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC23.73■■□□□ 1.39
CCNA1P78396 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CCNA1P78396 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC23.73■■□□□ 1.39
CCNA1P78396 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC23.73■■□□□ 1.39
CCNA1P78396 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC23.73■■□□□ 1.39
CCNA1P78396 SLC29A4P2-201ENST00000504749 1089 ntBASIC23.73■■□□□ 1.39
CCNA1P78396 AC069544.1-201ENST00000609399 999 ntBASIC23.73■■□□□ 1.39
CCNA1P78396 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
CCNA1P78396 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC23.73■■□□□ 1.39
CCNA1P78396 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CCNA1P78396 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC23.73■■□□□ 1.39
CCNA1P78396 FAM99A-202ENST00000538190 1989 ntBASIC23.72■■□□□ 1.39
CCNA1P78396 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CCNA1P78396 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CCNA1P78396 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CCNA1P78396 SPIB-206ENST00000596074 847 ntTSL 2 BASIC23.72■■□□□ 1.39
CCNA1P78396 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
CCNA1P78396 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
CCNA1P78396 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
CCNA1P78396 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
CCNA1P78396 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CCNA1P78396 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms