Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GABREP78334 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.81■□□□□ 0.76
GABREP78334 SNORA78-201ENST00000459373 127 ntBASIC19.81■□□□□ 0.76
GABREP78334 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.81■□□□□ 0.76
GABREP78334 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.81■□□□□ 0.76
GABREP78334 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.81■□□□□ 0.76
GABREP78334 RN7SL471P-201ENST00000580476 299 ntBASIC19.81■□□□□ 0.76
GABREP78334 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.81■□□□□ 0.76
GABREP78334 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GABREP78334 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
GABREP78334 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GABREP78334 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
GABREP78334 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.81■□□□□ 0.76
GABREP78334 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
GABREP78334 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
GABREP78334 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
GABREP78334 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GABREP78334 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
GABREP78334 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GABREP78334 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.8■□□□□ 0.76
GABREP78334 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
GABREP78334 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
GABREP78334 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GABREP78334 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
GABREP78334 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
GABREP78334 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.8■□□□□ 0.76
GABREP78334 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
GABREP78334 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.8■□□□□ 0.76
GABREP78334 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
GABREP78334 Z99916.2-201ENST00000604037 246 ntBASIC19.8■□□□□ 0.76
GABREP78334 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GABREP78334 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
GABREP78334 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
GABREP78334 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GABREP78334 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GABREP78334 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.79■□□□□ 0.76
GABREP78334 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.79■□□□□ 0.76
GABREP78334 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.79■□□□□ 0.76
GABREP78334 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
GABREP78334 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.79■□□□□ 0.76
GABREP78334 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.79■□□□□ 0.76
GABREP78334 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.79■□□□□ 0.76
GABREP78334 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.79■□□□□ 0.76
GABREP78334 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.79■□□□□ 0.76
GABREP78334 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GABREP78334 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.79■□□□□ 0.76
GABREP78334 SOX15-203ENST00000570788 1093 ntBASIC19.79■□□□□ 0.76
GABREP78334 AC233263.1-201ENST00000578059 224 ntBASIC19.79■□□□□ 0.76
GABREP78334 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GABREP78334 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
GABREP78334 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GABREP78334 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.78■□□□□ 0.76
GABREP78334 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GABREP78334 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.78■□□□□ 0.76
GABREP78334 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
GABREP78334 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.78■□□□□ 0.76
GABREP78334 AC069544.1-201ENST00000609399 999 ntBASIC19.78■□□□□ 0.76
GABREP78334 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GABREP78334 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
GABREP78334 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GABREP78334 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.78■□□□□ 0.76
GABREP78334 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GABREP78334 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.77■□□□□ 0.76
GABREP78334 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.77■□□□□ 0.76
GABREP78334 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GABREP78334 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.77■□□□□ 0.76
GABREP78334 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
GABREP78334 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
GABREP78334 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
GABREP78334 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.77■□□□□ 0.76
GABREP78334 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GABREP78334 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
GABREP78334 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GABREP78334 KRT18P68-201ENST00000392293 1000 ntBASIC19.77■□□□□ 0.76
GABREP78334 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
GABREP78334 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
GABREP78334 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.77■□□□□ 0.76
GABREP78334 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.77■□□□□ 0.76
GABREP78334 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
GABREP78334 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
GABREP78334 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.77■□□□□ 0.76
GABREP78334 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.77■□□□□ 0.76
GABREP78334 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GABREP78334 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
GABREP78334 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
GABREP78334 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GABREP78334 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
GABREP78334 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
GABREP78334 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GABREP78334 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.76■□□□□ 0.75
GABREP78334 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GABREP78334 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GABREP78334 MIR1224-201ENST00000408193 85 ntBASIC19.76■□□□□ 0.75
GABREP78334 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GABREP78334 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.76■□□□□ 0.75
GABREP78334 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.76■□□□□ 0.75
GABREP78334 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.76■□□□□ 0.75
GABREP78334 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.76■□□□□ 0.75
GABREP78334 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.76■□□□□ 0.75
GABREP78334 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms