Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CKS1BP61024 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC14.46□□□□□ -0.1
CKS1BP61024 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC14.46□□□□□ -0.1
CKS1BP61024 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
CKS1BP61024 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CKS1BP61024 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
CKS1BP61024 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
CKS1BP61024 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CKS1BP61024 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CKS1BP61024 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CKS1BP61024 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CKS1BP61024 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CKS1BP61024 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CKS1BP61024 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC14.45□□□□□ -0.1
CKS1BP61024 NKILA-201ENST00000613231 537 ntTSL 4 BASIC14.45□□□□□ -0.1
CKS1BP61024 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CKS1BP61024 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC14.45□□□□□ -0.1
CKS1BP61024 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CKS1BP61024 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CKS1BP61024 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC14.45□□□□□ -0.1
CKS1BP61024 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CKS1BP61024 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CKS1BP61024 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC14.45□□□□□ -0.1
CKS1BP61024 AC021242.3-201ENST00000607598 1377 ntBASIC14.45□□□□□ -0.1
CKS1BP61024 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CKS1BP61024 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CKS1BP61024 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC14.45□□□□□ -0.1
CKS1BP61024 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC14.45□□□□□ -0.1
CKS1BP61024 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC14.45□□□□□ -0.1
CKS1BP61024 AL157384.1-201ENST00000445995 2473 ntBASIC14.44□□□□□ -0.1
CKS1BP61024 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CKS1BP61024 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC14.44□□□□□ -0.1
CKS1BP61024 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CKS1BP61024 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CKS1BP61024 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CKS1BP61024 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC14.44□□□□□ -0.1
CKS1BP61024 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CKS1BP61024 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CKS1BP61024 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
CKS1BP61024 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CKS1BP61024 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CKS1BP61024 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
CKS1BP61024 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CKS1BP61024 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
CKS1BP61024 KRT125P-201ENST00000546827 989 ntBASIC14.44□□□□□ -0.1
CKS1BP61024 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CKS1BP61024 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CKS1BP61024 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CKS1BP61024 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CKS1BP61024 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
CKS1BP61024 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC14.44□□□□□ -0.1
CKS1BP61024 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CKS1BP61024 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
CKS1BP61024 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
CKS1BP61024 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
CKS1BP61024 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CKS1BP61024 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC14.44□□□□□ -0.1
CKS1BP61024 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CKS1BP61024 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CKS1BP61024 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CKS1BP61024 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CKS1BP61024 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CKS1BP61024 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CKS1BP61024 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC14.43□□□□□ -0.1
CKS1BP61024 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC14.43□□□□□ -0.1
CKS1BP61024 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC14.43□□□□□ -0.1
CKS1BP61024 MTDHP2-201ENST00000601468 714 ntBASIC14.43□□□□□ -0.1
CKS1BP61024 CA15P2-201ENST00000611168 834 ntBASIC14.43□□□□□ -0.1
CKS1BP61024 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC14.43□□□□□ -0.1
CKS1BP61024 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CKS1BP61024 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CKS1BP61024 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CKS1BP61024 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC14.43□□□□□ -0.1
CKS1BP61024 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CKS1BP61024 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CKS1BP61024 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CKS1BP61024 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CKS1BP61024 GOLGA2P6-201ENST00000340929 2049 ntBASIC14.42□□□□□ -0.1
CKS1BP61024 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CKS1BP61024 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
CKS1BP61024 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CKS1BP61024 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CKS1BP61024 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CKS1BP61024 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CKS1BP61024 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
CKS1BP61024 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CKS1BP61024 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC14.42□□□□□ -0.1
CKS1BP61024 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CKS1BP61024 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CKS1BP61024 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC14.42□□□□□ -0.1
CKS1BP61024 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CKS1BP61024 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC14.42□□□□□ -0.1
CKS1BP61024 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CKS1BP61024 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.42□□□□□ -0.1
CKS1BP61024 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CKS1BP61024 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CKS1BP61024 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CKS1BP61024 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CKS1BP61024 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CKS1BP61024 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms