Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC27.32■■□□□ 1.96
RIPK4P57078 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RIPK4P57078 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RIPK4P57078 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC27.31■■□□□ 1.96
RIPK4P57078 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
RIPK4P57078 ID1-201ENST00000376105 1233 ntBASIC27.31■■□□□ 1.96
RIPK4P57078 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
RIPK4P57078 AC016405.3-201ENST00000607710 860 ntBASIC27.31■■□□□ 1.96
RIPK4P57078 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC27.31■■□□□ 1.96
RIPK4P57078 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC27.31■■□□□ 1.96
RIPK4P57078 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC27.31■■□□□ 1.96
RIPK4P57078 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
RIPK4P57078 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
RIPK4P57078 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC27.31■■□□□ 1.96
RIPK4P57078 PARN-205ENST00000539279 1557 ntTSL 2 BASIC27.31■■□□□ 1.96
RIPK4P57078 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC27.3■■□□□ 1.96
RIPK4P57078 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
RIPK4P57078 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
RIPK4P57078 HLA-L-209ENST00000420110 1011 ntBASIC27.3■■□□□ 1.96
RIPK4P57078 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC27.3■■□□□ 1.96
RIPK4P57078 AC083906.2-201ENST00000511578 360 ntBASIC27.3■■□□□ 1.96
RIPK4P57078 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
RIPK4P57078 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC27.3■■□□□ 1.96
RIPK4P57078 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
RIPK4P57078 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
RIPK4P57078 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC27.29■■□□□ 1.96
RIPK4P57078 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
RIPK4P57078 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
RIPK4P57078 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
RIPK4P57078 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
RIPK4P57078 METTL15-202ENST00000403099 795 ntTSL 5 BASIC27.29■■□□□ 1.96
RIPK4P57078 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC27.29■■□□□ 1.96
RIPK4P57078 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC27.29■■□□□ 1.96
RIPK4P57078 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
RIPK4P57078 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC27.29■■□□□ 1.96
RIPK4P57078 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC27.29■■□□□ 1.96
RIPK4P57078 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
RIPK4P57078 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
RIPK4P57078 AC026310.3-201ENST00000625186 2373 ntBASIC27.29■■□□□ 1.96
RIPK4P57078 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
RIPK4P57078 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
RIPK4P57078 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC27.28■■□□□ 1.96
RIPK4P57078 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RIPK4P57078 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RIPK4P57078 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC27.28■■□□□ 1.96
RIPK4P57078 AC133552.2-202ENST00000575694 574 ntBASIC27.28■■□□□ 1.96
RIPK4P57078 AL121832.2-201ENST00000610979 668 ntBASIC27.28■■□□□ 1.96
RIPK4P57078 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
RIPK4P57078 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RIPK4P57078 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
RIPK4P57078 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
RIPK4P57078 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
RIPK4P57078 FEM1AP4-201ENST00000443167 1987 ntBASIC27.28■■□□□ 1.96
RIPK4P57078 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC27.27■■□□□ 1.96
RIPK4P57078 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
RIPK4P57078 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC27.27■■□□□ 1.96
RIPK4P57078 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
RIPK4P57078 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC27.27■■□□□ 1.96
RIPK4P57078 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
RIPK4P57078 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
RIPK4P57078 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC27.27■■□□□ 1.96
RIPK4P57078 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
RIPK4P57078 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
RIPK4P57078 OAS3-207ENST00000551007 998 ntTSL 2 BASIC27.27■■□□□ 1.96
RIPK4P57078 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC27.27■■□□□ 1.96
RIPK4P57078 AL162412.1-201ENST00000567129 965 ntBASIC27.27■■□□□ 1.96
RIPK4P57078 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC27.27■■□□□ 1.96
RIPK4P57078 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
RIPK4P57078 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC27.27■■□□□ 1.96
RIPK4P57078 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
RIPK4P57078 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC27.27■■□□□ 1.96
RIPK4P57078 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
RIPK4P57078 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.96
RIPK4P57078 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
RIPK4P57078 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
RIPK4P57078 GPX1P1-201ENST00000388829 606 ntBASIC27.26■■□□□ 1.95
RIPK4P57078 BET1L-204ENST00000410108 637 ntTSL 3 BASIC27.26■■□□□ 1.95
RIPK4P57078 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC27.26■■□□□ 1.95
RIPK4P57078 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
RIPK4P57078 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
RIPK4P57078 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
RIPK4P57078 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC27.25■■□□□ 1.95
RIPK4P57078 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
RIPK4P57078 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
RIPK4P57078 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
RIPK4P57078 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
RIPK4P57078 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC27.25■■□□□ 1.95
RIPK4P57078 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
RIPK4P57078 PTPA-214ENST00000423100 988 ntTSL 2 BASIC27.25■■□□□ 1.95
RIPK4P57078 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
RIPK4P57078 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
RIPK4P57078 AC104771.1-201ENST00000603335 964 ntBASIC27.25■■□□□ 1.95
RIPK4P57078 AL109923.1-201ENST00000618799 583 ntBASIC27.25■■□□□ 1.95
RIPK4P57078 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
RIPK4P57078 AF106564.1-201ENST00000607058 2553 ntBASIC27.25■■□□□ 1.95
RIPK4P57078 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
RIPK4P57078 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC27.24■■□□□ 1.95
RIPK4P57078 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
RIPK4P57078 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
RIPK4P57078 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms