Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
NR1H2P55055 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NR1H2P55055 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NR1H2P55055 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NR1H2P55055 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.59■□□□□ 0.73
NR1H2P55055 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NR1H2P55055 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NR1H2P55055 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NR1H2P55055 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
NR1H2P55055 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NR1H2P55055 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NR1H2P55055 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NR1H2P55055 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NR1H2P55055 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NR1H2P55055 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.59■□□□□ 0.73
NR1H2P55055 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NR1H2P55055 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.59■□□□□ 0.73
NR1H2P55055 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NR1H2P55055 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NR1H2P55055 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NR1H2P55055 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NR1H2P55055 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.59■□□□□ 0.73
NR1H2P55055 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
NR1H2P55055 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
NR1H2P55055 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NR1H2P55055 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
NR1H2P55055 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
NR1H2P55055 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.58■□□□□ 0.73
NR1H2P55055 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.73
NR1H2P55055 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
NR1H2P55055 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.58■□□□□ 0.73
NR1H2P55055 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
NR1H2P55055 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NR1H2P55055 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NR1H2P55055 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.58■□□□□ 0.73
NR1H2P55055 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.58■□□□□ 0.72
NR1H2P55055 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.58■□□□□ 0.72
NR1H2P55055 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NR1H2P55055 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NR1H2P55055 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.58■□□□□ 0.72
NR1H2P55055 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.58■□□□□ 0.72
NR1H2P55055 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NR1H2P55055 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NR1H2P55055 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.58■□□□□ 0.72
NR1H2P55055 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NR1H2P55055 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NR1H2P55055 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NR1H2P55055 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NR1H2P55055 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.57■□□□□ 0.72
NR1H2P55055 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NR1H2P55055 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NR1H2P55055 CA15P2-201ENST00000611168 834 ntBASIC19.57■□□□□ 0.72
NR1H2P55055 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
NR1H2P55055 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
NR1H2P55055 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
NR1H2P55055 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NR1H2P55055 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.57■□□□□ 0.72
NR1H2P55055 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.57■□□□□ 0.72
NR1H2P55055 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NR1H2P55055 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
NR1H2P55055 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
NR1H2P55055 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NR1H2P55055 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.56■□□□□ 0.72
NR1H2P55055 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
NR1H2P55055 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NR1H2P55055 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NR1H2P55055 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NR1H2P55055 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NR1H2P55055 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.56■□□□□ 0.72
NR1H2P55055 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.56■□□□□ 0.72
NR1H2P55055 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.56■□□□□ 0.72
NR1H2P55055 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NR1H2P55055 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.56■□□□□ 0.72
NR1H2P55055 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
NR1H2P55055 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NR1H2P55055 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NR1H2P55055 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
NR1H2P55055 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NR1H2P55055 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NR1H2P55055 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.56■□□□□ 0.72
NR1H2P55055 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NR1H2P55055 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.56■□□□□ 0.72
NR1H2P55055 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
NR1H2P55055 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NR1H2P55055 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NR1H2P55055 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.56■□□□□ 0.72
NR1H2P55055 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
NR1H2P55055 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NR1H2P55055 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.56■□□□□ 0.72
NR1H2P55055 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NR1H2P55055 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
NR1H2P55055 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
NR1H2P55055 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.55■□□□□ 0.72
NR1H2P55055 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.55■□□□□ 0.72
NR1H2P55055 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NR1H2P55055 AL049796.1-201ENST00000565336 1766 ntBASIC19.55■□□□□ 0.72
NR1H2P55055 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NR1H2P55055 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NR1H2P55055 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.55■□□□□ 0.72
NR1H2P55055 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms