Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PSMD4P55036 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PSMD4P55036 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.34■□□□□ 0.69
PSMD4P55036 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PSMD4P55036 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PSMD4P55036 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PSMD4P55036 AL024507.2-201ENST00000606070 2574 ntBASIC19.34■□□□□ 0.69
PSMD4P55036 KRT16P2-201ENST00000414673 1423 ntBASIC19.34■□□□□ 0.69
PSMD4P55036 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.33■□□□□ 0.69
PSMD4P55036 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PSMD4P55036 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.33■□□□□ 0.68
PSMD4P55036 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.33■□□□□ 0.68
PSMD4P55036 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PSMD4P55036 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
PSMD4P55036 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PSMD4P55036 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PSMD4P55036 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PSMD4P55036 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PSMD4P55036 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PSMD4P55036 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.33■□□□□ 0.68
PSMD4P55036 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PSMD4P55036 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.33■□□□□ 0.68
PSMD4P55036 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PSMD4P55036 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PSMD4P55036 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PSMD4P55036 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PSMD4P55036 AL049796.1-201ENST00000565336 1766 ntBASIC19.32■□□□□ 0.68
PSMD4P55036 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.32■□□□□ 0.68
PSMD4P55036 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PSMD4P55036 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PSMD4P55036 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
PSMD4P55036 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.32■□□□□ 0.68
PSMD4P55036 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PSMD4P55036 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.32■□□□□ 0.68
PSMD4P55036 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PSMD4P55036 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PSMD4P55036 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PSMD4P55036 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PSMD4P55036 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PSMD4P55036 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.31■□□□□ 0.68
PSMD4P55036 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
PSMD4P55036 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PSMD4P55036 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.31■□□□□ 0.68
PSMD4P55036 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PSMD4P55036 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.31■□□□□ 0.68
PSMD4P55036 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PSMD4P55036 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.31■□□□□ 0.68
PSMD4P55036 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PSMD4P55036 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PSMD4P55036 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PSMD4P55036 AC061975.6-201ENST00000579045 1553 ntBASIC19.31■□□□□ 0.68
PSMD4P55036 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PSMD4P55036 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PSMD4P55036 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.3■□□□□ 0.68
PSMD4P55036 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PSMD4P55036 MIR935-201ENST00000401179 91 ntBASIC19.3■□□□□ 0.68
PSMD4P55036 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PSMD4P55036 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PSMD4P55036 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.3■□□□□ 0.68
PSMD4P55036 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.3■□□□□ 0.68
PSMD4P55036 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PSMD4P55036 AL137060.1-201ENST00000618151 2648 ntBASIC19.3■□□□□ 0.68
PSMD4P55036 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.29■□□□□ 0.68
PSMD4P55036 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
PSMD4P55036 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PSMD4P55036 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
PSMD4P55036 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PSMD4P55036 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.29■□□□□ 0.68
PSMD4P55036 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.29■□□□□ 0.68
PSMD4P55036 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.29■□□□□ 0.68
PSMD4P55036 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PSMD4P55036 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PSMD4P55036 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PSMD4P55036 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PSMD4P55036 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PSMD4P55036 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PSMD4P55036 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PSMD4P55036 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PSMD4P55036 AC005229.4-201ENST00000610085 2198 ntBASIC19.29■□□□□ 0.68
PSMD4P55036 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PSMD4P55036 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PSMD4P55036 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PSMD4P55036 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PSMD4P55036 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PSMD4P55036 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PSMD4P55036 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.28■□□□□ 0.68
PSMD4P55036 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PSMD4P55036 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PSMD4P55036 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PSMD4P55036 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
PSMD4P55036 KRT18P11-201ENST00000435214 1283 ntBASIC19.28■□□□□ 0.68
PSMD4P55036 KRT18P5-201ENST00000436075 1291 ntBASIC19.28■□□□□ 0.68
PSMD4P55036 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PSMD4P55036 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.28■□□□□ 0.68
PSMD4P55036 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.28■□□□□ 0.68
PSMD4P55036 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.28■□□□□ 0.68
PSMD4P55036 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.28■□□□□ 0.68
PSMD4P55036 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PSMD4P55036 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PSMD4P55036 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms