Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PTPN5P54829 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC21.53■■□□□ 1.04
PTPN5P54829 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
PTPN5P54829 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.53■■□□□ 1.04
PTPN5P54829 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.53■■□□□ 1.04
PTPN5P54829 PPOX-219ENST00000544598 813 ntTSL 2 BASIC21.53■■□□□ 1.04
PTPN5P54829 AL034346.1-201ENST00000568244 1277 ntBASIC21.53■■□□□ 1.04
PTPN5P54829 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.53■■□□□ 1.04
PTPN5P54829 AC008403.3-201ENST00000598924 454 ntBASIC21.53■■□□□ 1.04
PTPN5P54829 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PTPN5P54829 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PTPN5P54829 AC092053.2-201ENST00000640557 1818 ntBASIC21.52■■□□□ 1.04
PTPN5P54829 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PTPN5P54829 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.52■■□□□ 1.04
PTPN5P54829 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PTPN5P54829 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PTPN5P54829 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.52■■□□□ 1.04
PTPN5P54829 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PTPN5P54829 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC21.52■■□□□ 1.04
PTPN5P54829 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.52■■□□□ 1.04
PTPN5P54829 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.52■■□□□ 1.04
PTPN5P54829 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
PTPN5P54829 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PTPN5P54829 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PTPN5P54829 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
PTPN5P54829 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.03
PTPN5P54829 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.03
PTPN5P54829 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
PTPN5P54829 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
PTPN5P54829 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PTPN5P54829 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PTPN5P54829 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
PTPN5P54829 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.51■■□□□ 1.03
PTPN5P54829 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PTPN5P54829 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.51■■□□□ 1.03
PTPN5P54829 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
PTPN5P54829 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.51■■□□□ 1.03
PTPN5P54829 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC21.51■■□□□ 1.03
PTPN5P54829 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PTPN5P54829 AC010980.2-201ENST00000587099 1412 ntBASIC21.51■■□□□ 1.03
PTPN5P54829 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PTPN5P54829 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PTPN5P54829 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PTPN5P54829 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PTPN5P54829 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PTPN5P54829 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.5■■□□□ 1.03
PTPN5P54829 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PTPN5P54829 KRT17P3-201ENST00000420566 1262 ntBASIC21.5■■□□□ 1.03
PTPN5P54829 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.5■■□□□ 1.03
PTPN5P54829 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.5■■□□□ 1.03
PTPN5P54829 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.5■■□□□ 1.03
PTPN5P54829 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.5■■□□□ 1.03
PTPN5P54829 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
PTPN5P54829 RN7SL471P-201ENST00000580476 299 ntBASIC21.5■■□□□ 1.03
PTPN5P54829 AC097493.4-201ENST00000641197 219 ntBASIC21.5■■□□□ 1.03
PTPN5P54829 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PTPN5P54829 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PTPN5P54829 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PTPN5P54829 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PTPN5P54829 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
PTPN5P54829 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.49■■□□□ 1.03
PTPN5P54829 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
PTPN5P54829 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.49■■□□□ 1.03
PTPN5P54829 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PTPN5P54829 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PTPN5P54829 AC087499.1-201ENST00000418141 1075 ntBASIC21.49■■□□□ 1.03
PTPN5P54829 TMPOP1-202ENST00000424642 1267 ntBASIC21.49■■□□□ 1.03
PTPN5P54829 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.49■■□□□ 1.03
PTPN5P54829 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
PTPN5P54829 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.49■■□□□ 1.03
PTPN5P54829 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
PTPN5P54829 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
PTPN5P54829 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PTPN5P54829 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
PTPN5P54829 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PTPN5P54829 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PTPN5P54829 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.48■■□□□ 1.03
PTPN5P54829 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PTPN5P54829 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PTPN5P54829 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PTPN5P54829 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
PTPN5P54829 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
PTPN5P54829 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PTPN5P54829 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PTPN5P54829 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PTPN5P54829 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.48■■□□□ 1.03
PTPN5P54829 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.48■■□□□ 1.03
PTPN5P54829 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.48■■□□□ 1.03
PTPN5P54829 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PTPN5P54829 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PTPN5P54829 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.48■■□□□ 1.03
PTPN5P54829 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PTPN5P54829 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
PTPN5P54829 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.48■■□□□ 1.03
PTPN5P54829 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PTPN5P54829 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PTPN5P54829 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.47■■□□□ 1.03
PTPN5P54829 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PTPN5P54829 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
PTPN5P54829 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms