Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.83■■□□□ 1.09
ATXN1P54253 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.83■■□□□ 1.09
ATXN1P54253 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
ATXN1P54253 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
ATXN1P54253 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
ATXN1P54253 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
ATXN1P54253 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ATXN1P54253 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
ATXN1P54253 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ATXN1P54253 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ATXN1P54253 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ATXN1P54253 AC069152.1-201ENST00000438030 544 ntBASIC21.82■■□□□ 1.08
ATXN1P54253 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
ATXN1P54253 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.82■■□□□ 1.08
ATXN1P54253 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.82■■□□□ 1.08
ATXN1P54253 AL138781.1-201ENST00000566567 1274 ntBASIC21.82■■□□□ 1.08
ATXN1P54253 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.82■■□□□ 1.08
ATXN1P54253 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.82■■□□□ 1.08
ATXN1P54253 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
ATXN1P54253 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ATXN1P54253 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ATXN1P54253 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ATXN1P54253 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
ATXN1P54253 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
ATXN1P54253 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ATXN1P54253 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.81■■□□□ 1.08
ATXN1P54253 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
ATXN1P54253 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.81■■□□□ 1.08
ATXN1P54253 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ATXN1P54253 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.81■■□□□ 1.08
ATXN1P54253 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.81■■□□□ 1.08
ATXN1P54253 UBE2DNL-204ENST00000602536 740 ntBASIC21.81■■□□□ 1.08
ATXN1P54253 AC008175.2-201ENST00000612840 297 ntBASIC21.81■■□□□ 1.08
ATXN1P54253 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ATXN1P54253 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ATXN1P54253 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.81■■□□□ 1.08
ATXN1P54253 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.81■■□□□ 1.08
ATXN1P54253 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.81■■□□□ 1.08
ATXN1P54253 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
ATXN1P54253 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATXN1P54253 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
ATXN1P54253 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.8■■□□□ 1.08
ATXN1P54253 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ATXN1P54253 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATXN1P54253 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATXN1P54253 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ATXN1P54253 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATXN1P54253 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATXN1P54253 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATXN1P54253 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATXN1P54253 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.8■■□□□ 1.08
ATXN1P54253 AL050303.2-201ENST00000619798 666 ntBASIC21.8■■□□□ 1.08
ATXN1P54253 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATXN1P54253 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
ATXN1P54253 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATXN1P54253 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ATXN1P54253 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ATXN1P54253 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
ATXN1P54253 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATXN1P54253 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATXN1P54253 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ATXN1P54253 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ATXN1P54253 GUSBP6-202ENST00000438529 1198 ntBASIC21.79■■□□□ 1.08
ATXN1P54253 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.79■■□□□ 1.08
ATXN1P54253 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.79■■□□□ 1.08
ATXN1P54253 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.79■■□□□ 1.08
ATXN1P54253 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ATXN1P54253 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
ATXN1P54253 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ATXN1P54253 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
ATXN1P54253 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.79■■□□□ 1.08
ATXN1P54253 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ATXN1P54253 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.78■■□□□ 1.08
ATXN1P54253 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATXN1P54253 POU5F1P4-201ENST00000413175 1085 ntBASIC21.78■■□□□ 1.08
ATXN1P54253 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.78■■□□□ 1.08
ATXN1P54253 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.78■■□□□ 1.08
ATXN1P54253 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATXN1P54253 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.78■■□□□ 1.08
ATXN1P54253 ITM2C-210ENST00000620962 501 ntBASIC21.78■■□□□ 1.08
ATXN1P54253 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ATXN1P54253 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.78■■□□□ 1.08
ATXN1P54253 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ATXN1P54253 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.77■■□□□ 1.08
ATXN1P54253 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ATXN1P54253 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ATXN1P54253 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
ATXN1P54253 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ATXN1P54253 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
ATXN1P54253 KRT18P29-201ENST00000397031 1267 ntBASIC21.77■■□□□ 1.08
ATXN1P54253 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ATXN1P54253 POU5F1P3-201ENST00000428824 1078 ntBASIC21.77■■□□□ 1.08
ATXN1P54253 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.77■■□□□ 1.08
ATXN1P54253 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ATXN1P54253 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ATXN1P54253 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ATXN1P54253 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.77■■□□□ 1.07
ATXN1P54253 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
ATXN1P54253 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
ATXN1P54253 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms