Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 SLC25A24-204ENST00000569674 2357 ntBASIC20.95■□□□□ 0.94
LIMK2P53671 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LIMK2P53671 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LIMK2P53671 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LIMK2P53671 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
LIMK2P53671 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.95■□□□□ 0.94
LIMK2P53671 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LIMK2P53671 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.94■□□□□ 0.94
LIMK2P53671 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
LIMK2P53671 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LIMK2P53671 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LIMK2P53671 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LIMK2P53671 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LIMK2P53671 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
LIMK2P53671 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
LIMK2P53671 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LIMK2P53671 AC006015.1-201ENST00000429970 570 ntBASIC20.94■□□□□ 0.94
LIMK2P53671 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LIMK2P53671 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
LIMK2P53671 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LIMK2P53671 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LIMK2P53671 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LIMK2P53671 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LIMK2P53671 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
LIMK2P53671 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LIMK2P53671 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LIMK2P53671 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LIMK2P53671 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
LIMK2P53671 AC137761.2-201ENST00000561729 223 ntBASIC20.93■□□□□ 0.94
LIMK2P53671 AC145350.3-201ENST00000569033 163 ntBASIC20.93■□□□□ 0.94
LIMK2P53671 FEM1AP1-201ENST00000431297 1995 ntBASIC20.93■□□□□ 0.94
LIMK2P53671 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LIMK2P53671 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LIMK2P53671 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.93■□□□□ 0.94
LIMK2P53671 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LIMK2P53671 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LIMK2P53671 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LIMK2P53671 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.92■□□□□ 0.94
LIMK2P53671 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LIMK2P53671 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LIMK2P53671 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LIMK2P53671 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LIMK2P53671 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.92■□□□□ 0.94
LIMK2P53671 AC016769.1-201ENST00000409132 1010 ntBASIC20.92■□□□□ 0.94
LIMK2P53671 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.92■□□□□ 0.94
LIMK2P53671 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.92■□□□□ 0.94
LIMK2P53671 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.92■□□□□ 0.94
LIMK2P53671 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.92■□□□□ 0.94
LIMK2P53671 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.92■□□□□ 0.94
LIMK2P53671 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LIMK2P53671 AC004854.2-201ENST00000608450 1441 ntBASIC20.92■□□□□ 0.94
LIMK2P53671 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.92■□□□□ 0.94
LIMK2P53671 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LIMK2P53671 AC005224.4-201ENST00000583262 1652 ntBASIC20.92■□□□□ 0.94
LIMK2P53671 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LIMK2P53671 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LIMK2P53671 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LIMK2P53671 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
LIMK2P53671 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LIMK2P53671 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.92■□□□□ 0.94
LIMK2P53671 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
LIMK2P53671 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.91■□□□□ 0.94
LIMK2P53671 LINC01006-201ENST00000333319 2292 ntBASIC20.91■□□□□ 0.94
LIMK2P53671 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.91■□□□□ 0.94
LIMK2P53671 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.91■□□□□ 0.94
LIMK2P53671 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.91■□□□□ 0.94
LIMK2P53671 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
LIMK2P53671 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.91■□□□□ 0.94
LIMK2P53671 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LIMK2P53671 AC006128.1-201ENST00000624704 1661 ntBASIC20.91■□□□□ 0.94
LIMK2P53671 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.91■□□□□ 0.94
LIMK2P53671 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
LIMK2P53671 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.91■□□□□ 0.94
LIMK2P53671 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
LIMK2P53671 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
LIMK2P53671 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LIMK2P53671 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LIMK2P53671 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LIMK2P53671 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LIMK2P53671 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
LIMK2P53671 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
LIMK2P53671 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LIMK2P53671 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LIMK2P53671 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.9■□□□□ 0.94
LIMK2P53671 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.9■□□□□ 0.94
LIMK2P53671 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
LIMK2P53671 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
LIMK2P53671 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.9■□□□□ 0.94
LIMK2P53671 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.9■□□□□ 0.94
LIMK2P53671 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.9■□□□□ 0.94
LIMK2P53671 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LIMK2P53671 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LIMK2P53671 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
LIMK2P53671 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LIMK2P53671 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
LIMK2P53671 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.9■□□□□ 0.94
LIMK2P53671 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LIMK2P53671 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
LIMK2P53671 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
LIMK2P53671 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms