Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
HMGA2P52926 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
HMGA2P52926 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.01■□□□□ 0.63
HMGA2P52926 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HMGA2P52926 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19■□□□□ 0.63
HMGA2P52926 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19■□□□□ 0.63
HMGA2P52926 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HMGA2P52926 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
HMGA2P52926 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19■□□□□ 0.63
HMGA2P52926 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HMGA2P52926 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19■□□□□ 0.63
HMGA2P52926 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19■□□□□ 0.63
HMGA2P52926 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19■□□□□ 0.63
HMGA2P52926 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HMGA2P52926 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HMGA2P52926 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HMGA2P52926 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19■□□□□ 0.63
HMGA2P52926 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19■□□□□ 0.63
HMGA2P52926 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMGA2P52926 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.99■□□□□ 0.63
HMGA2P52926 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HMGA2P52926 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMGA2P52926 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMGA2P52926 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMGA2P52926 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.99■□□□□ 0.63
HMGA2P52926 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.99■□□□□ 0.63
HMGA2P52926 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMGA2P52926 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HMGA2P52926 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.99■□□□□ 0.63
HMGA2P52926 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.99■□□□□ 0.63
HMGA2P52926 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.99■□□□□ 0.63
HMGA2P52926 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMGA2P52926 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.99■□□□□ 0.63
HMGA2P52926 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.99■□□□□ 0.63
HMGA2P52926 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HMGA2P52926 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.99■□□□□ 0.63
HMGA2P52926 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
HMGA2P52926 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.99■□□□□ 0.63
HMGA2P52926 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGA2P52926 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
HMGA2P52926 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGA2P52926 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.98■□□□□ 0.63
HMGA2P52926 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.98■□□□□ 0.63
HMGA2P52926 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.98■□□□□ 0.63
HMGA2P52926 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HMGA2P52926 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.98■□□□□ 0.63
HMGA2P52926 AC099778.1-201ENST00000568593 1911 ntBASIC18.98■□□□□ 0.63
HMGA2P52926 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HMGA2P52926 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGA2P52926 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.98■□□□□ 0.63
HMGA2P52926 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGA2P52926 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.98■□□□□ 0.63
HMGA2P52926 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.98■□□□□ 0.63
HMGA2P52926 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.98■□□□□ 0.63
HMGA2P52926 AC126544.1-201ENST00000580842 1059 ntBASIC18.98■□□□□ 0.63
HMGA2P52926 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HMGA2P52926 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HMGA2P52926 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.98■□□□□ 0.63
HMGA2P52926 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.98■□□□□ 0.63
HMGA2P52926 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
HMGA2P52926 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HMGA2P52926 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HMGA2P52926 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HMGA2P52926 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGA2P52926 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGA2P52926 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGA2P52926 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGA2P52926 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGA2P52926 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGA2P52926 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.97■□□□□ 0.63
HMGA2P52926 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
HMGA2P52926 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
HMGA2P52926 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HMGA2P52926 EEF1DP3-203ENST00000566025 782 ntBASIC18.97■□□□□ 0.63
HMGA2P52926 AC053503.5-201ENST00000601508 636 ntBASIC18.97■□□□□ 0.63
HMGA2P52926 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HMGA2P52926 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGA2P52926 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
HMGA2P52926 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HMGA2P52926 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HMGA2P52926 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.97■□□□□ 0.63
HMGA2P52926 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGA2P52926 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGA2P52926 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGA2P52926 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGA2P52926 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HMGA2P52926 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HMGA2P52926 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.96■□□□□ 0.63
HMGA2P52926 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.96■□□□□ 0.63
HMGA2P52926 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGA2P52926 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.96■□□□□ 0.63
HMGA2P52926 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGA2P52926 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.96■□□□□ 0.63
HMGA2P52926 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HMGA2P52926 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.96■□□□□ 0.63
HMGA2P52926 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGA2P52926 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGA2P52926 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGA2P52926 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGA2P52926 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms