Protein–RNA interactions for Protein: P50213

IDH3A, Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3AP50213 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
IDH3AP50213 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
IDH3AP50213 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
IDH3AP50213 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
IDH3AP50213 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
IDH3AP50213 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
IDH3AP50213 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.21■□□□□ 0.83
IDH3AP50213 AL138724.1-201ENST00000606771 1088 ntBASIC20.21■□□□□ 0.83
IDH3AP50213 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
IDH3AP50213 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
IDH3AP50213 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
IDH3AP50213 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
IDH3AP50213 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
IDH3AP50213 SYT6-210ENST00000641643 1587 ntBASIC20.21■□□□□ 0.83
IDH3AP50213 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
IDH3AP50213 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
IDH3AP50213 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.2■□□□□ 0.82
IDH3AP50213 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.2■□□□□ 0.82
IDH3AP50213 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
IDH3AP50213 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
IDH3AP50213 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
IDH3AP50213 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.2■□□□□ 0.82
IDH3AP50213 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.2■□□□□ 0.82
IDH3AP50213 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.2■□□□□ 0.82
IDH3AP50213 AL512631.2-201ENST00000604634 923 ntBASIC20.2■□□□□ 0.82
IDH3AP50213 AC136469.2-201ENST00000623944 1028 ntBASIC20.2■□□□□ 0.82
IDH3AP50213 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
IDH3AP50213 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
IDH3AP50213 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.2■□□□□ 0.82
IDH3AP50213 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.2■□□□□ 0.82
IDH3AP50213 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
IDH3AP50213 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
IDH3AP50213 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
IDH3AP50213 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.19■□□□□ 0.82
IDH3AP50213 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
IDH3AP50213 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
IDH3AP50213 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
IDH3AP50213 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
IDH3AP50213 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
IDH3AP50213 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.19■□□□□ 0.82
IDH3AP50213 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
IDH3AP50213 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.19■□□□□ 0.82
IDH3AP50213 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
IDH3AP50213 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
IDH3AP50213 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
IDH3AP50213 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
IDH3AP50213 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
IDH3AP50213 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.19■□□□□ 0.82
IDH3AP50213 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
IDH3AP50213 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
IDH3AP50213 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
IDH3AP50213 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.18■□□□□ 0.82
IDH3AP50213 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.18■□□□□ 0.82
IDH3AP50213 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
IDH3AP50213 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.18■□□□□ 0.82
IDH3AP50213 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.18■□□□□ 0.82
IDH3AP50213 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.18■□□□□ 0.82
IDH3AP50213 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
IDH3AP50213 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
IDH3AP50213 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
IDH3AP50213 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.18■□□□□ 0.82
IDH3AP50213 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
IDH3AP50213 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
IDH3AP50213 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
IDH3AP50213 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
IDH3AP50213 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.17■□□□□ 0.82
IDH3AP50213 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
IDH3AP50213 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.17■□□□□ 0.82
IDH3AP50213 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
IDH3AP50213 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.17■□□□□ 0.82
IDH3AP50213 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.17■□□□□ 0.82
IDH3AP50213 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.17■□□□□ 0.82
IDH3AP50213 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
IDH3AP50213 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.17■□□□□ 0.82
IDH3AP50213 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
IDH3AP50213 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
IDH3AP50213 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
IDH3AP50213 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
IDH3AP50213 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
IDH3AP50213 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
IDH3AP50213 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
IDH3AP50213 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.16■□□□□ 0.82
IDH3AP50213 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
IDH3AP50213 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.16■□□□□ 0.82
IDH3AP50213 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
IDH3AP50213 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.16■□□□□ 0.82
IDH3AP50213 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
IDH3AP50213 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
IDH3AP50213 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
IDH3AP50213 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.16■□□□□ 0.82
IDH3AP50213 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.16■□□□□ 0.82
IDH3AP50213 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.16■□□□□ 0.82
IDH3AP50213 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
IDH3AP50213 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
IDH3AP50213 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
IDH3AP50213 BX005040.4-201ENST00000637145 1518 ntBASIC20.16■□□□□ 0.82
IDH3AP50213 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.16■□□□□ 0.82
IDH3AP50213 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
IDH3AP50213 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
IDH3AP50213 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms