Protein–RNA interactions for Protein: P49918

CDKN1C, Cyclin-dependent kinase inhibitor 1C, humanhuman

Predicted RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1CP49918 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CDKN1CP49918 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDKN1CP49918 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDKN1CP49918 PLK5-205ENST00000642079 1969 ntBASIC20.68■□□□□ 0.9
CDKN1CP49918 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDKN1CP49918 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDKN1CP49918 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CDKN1CP49918 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.68■□□□□ 0.9
CDKN1CP49918 AC137761.2-201ENST00000561729 223 ntBASIC20.68■□□□□ 0.9
CDKN1CP49918 AC145350.3-201ENST00000569033 163 ntBASIC20.68■□□□□ 0.9
CDKN1CP49918 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDKN1CP49918 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDKN1CP49918 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDKN1CP49918 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDKN1CP49918 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDKN1CP49918 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.67■□□□□ 0.9
CDKN1CP49918 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CDKN1CP49918 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.67■□□□□ 0.9
CDKN1CP49918 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.67■□□□□ 0.9
CDKN1CP49918 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CDKN1CP49918 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDKN1CP49918 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.67■□□□□ 0.9
CDKN1CP49918 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.67■□□□□ 0.9
CDKN1CP49918 AC022517.1-201ENST00000592429 346 ntBASIC20.67■□□□□ 0.9
CDKN1CP49918 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.67■□□□□ 0.9
CDKN1CP49918 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDKN1CP49918 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDKN1CP49918 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.67■□□□□ 0.9
CDKN1CP49918 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDKN1CP49918 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDKN1CP49918 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDKN1CP49918 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDKN1CP49918 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDKN1CP49918 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDKN1CP49918 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDKN1CP49918 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDKN1CP49918 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CDKN1CP49918 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.66■□□□□ 0.9
CDKN1CP49918 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.66■□□□□ 0.9
CDKN1CP49918 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDKN1CP49918 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.66■□□□□ 0.9
CDKN1CP49918 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.66■□□□□ 0.9
CDKN1CP49918 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.66■□□□□ 0.9
CDKN1CP49918 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.66■□□□□ 0.9
CDKN1CP49918 MYCNOS-205ENST00000641950 531 ntBASIC20.66■□□□□ 0.9
CDKN1CP49918 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDKN1CP49918 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDKN1CP49918 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CDKN1CP49918 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.66■□□□□ 0.9
CDKN1CP49918 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDKN1CP49918 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDKN1CP49918 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CDKN1CP49918 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CDKN1CP49918 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDKN1CP49918 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CDKN1CP49918 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDKN1CP49918 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.65■□□□□ 0.9
CDKN1CP49918 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDKN1CP49918 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CDKN1CP49918 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDKN1CP49918 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.65■□□□□ 0.9
CDKN1CP49918 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.65■□□□□ 0.9
CDKN1CP49918 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.65■□□□□ 0.9
CDKN1CP49918 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CDKN1CP49918 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDKN1CP49918 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDKN1CP49918 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.65■□□□□ 0.9
CDKN1CP49918 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.65■□□□□ 0.9
CDKN1CP49918 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDKN1CP49918 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.65■□□□□ 0.9
CDKN1CP49918 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDKN1CP49918 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDKN1CP49918 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CDKN1CP49918 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDKN1CP49918 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CDKN1CP49918 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CDKN1CP49918 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
CDKN1CP49918 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDKN1CP49918 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDKN1CP49918 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.64■□□□□ 0.89
CDKN1CP49918 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.64■□□□□ 0.89
CDKN1CP49918 IKBKGP1-201ENST00000612193 1073 ntBASIC20.64■□□□□ 0.89
CDKN1CP49918 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.64■□□□□ 0.89
CDKN1CP49918 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDKN1CP49918 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.64■□□□□ 0.89
CDKN1CP49918 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDKN1CP49918 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.64■□□□□ 0.89
CDKN1CP49918 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.63■□□□□ 0.89
CDKN1CP49918 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDKN1CP49918 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDKN1CP49918 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.63■□□□□ 0.89
CDKN1CP49918 RBM17P2-201ENST00000616397 1405 ntBASIC20.63■□□□□ 0.89
CDKN1CP49918 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CDKN1CP49918 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDKN1CP49918 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDKN1CP49918 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.63■□□□□ 0.89
CDKN1CP49918 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.63■□□□□ 0.89
CDKN1CP49918 SLC7A5P1-201ENST00000568957 537 ntBASIC20.63■□□□□ 0.89
CDKN1CP49918 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CDKN1CP49918 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms