Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLK1P49759 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLK1P49759 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CLK1P49759 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLK1P49759 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CLK1P49759 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLK1P49759 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.39■□□□□ 0.69
CLK1P49759 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.39■□□□□ 0.69
CLK1P49759 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLK1P49759 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLK1P49759 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.39■□□□□ 0.69
CLK1P49759 AC012414.1-201ENST00000556676 535 ntBASIC19.39■□□□□ 0.69
CLK1P49759 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.39■□□□□ 0.69
CLK1P49759 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.39■□□□□ 0.69
CLK1P49759 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLK1P49759 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.39■□□□□ 0.69
CLK1P49759 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLK1P49759 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLK1P49759 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLK1P49759 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLK1P49759 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLK1P49759 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLK1P49759 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
CLK1P49759 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.38■□□□□ 0.69
CLK1P49759 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLK1P49759 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.38■□□□□ 0.69
CLK1P49759 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CLK1P49759 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CLK1P49759 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLK1P49759 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CLK1P49759 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.38■□□□□ 0.69
CLK1P49759 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.38■□□□□ 0.69
CLK1P49759 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLK1P49759 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLK1P49759 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLK1P49759 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CLK1P49759 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLK1P49759 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CLK1P49759 AL391422.3-201ENST00000603791 2761 ntBASIC19.38■□□□□ 0.69
CLK1P49759 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CLK1P49759 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLK1P49759 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.37■□□□□ 0.69
CLK1P49759 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLK1P49759 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.37■□□□□ 0.69
CLK1P49759 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLK1P49759 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLK1P49759 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.37■□□□□ 0.69
CLK1P49759 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CLK1P49759 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.37■□□□□ 0.69
CLK1P49759 AP004607.7-201ENST00000527152 1677 ntBASIC19.37■□□□□ 0.69
CLK1P49759 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CLK1P49759 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.37■□□□□ 0.69
CLK1P49759 AC009237.3-201ENST00000393279 1427 ntBASIC19.37■□□□□ 0.69
CLK1P49759 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CLK1P49759 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.37■□□□□ 0.69
CLK1P49759 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.37■□□□□ 0.69
CLK1P49759 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLK1P49759 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CLK1P49759 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLK1P49759 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CLK1P49759 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLK1P49759 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLK1P49759 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLK1P49759 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLK1P49759 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLK1P49759 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CLK1P49759 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLK1P49759 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.36■□□□□ 0.69
CLK1P49759 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLK1P49759 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CLK1P49759 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.36■□□□□ 0.69
CLK1P49759 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLK1P49759 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLK1P49759 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLK1P49759 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.36■□□□□ 0.69
CLK1P49759 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CLK1P49759 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
CLK1P49759 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CLK1P49759 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.35■□□□□ 0.69
CLK1P49759 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
CLK1P49759 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLK1P49759 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLK1P49759 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.35■□□□□ 0.69
CLK1P49759 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLK1P49759 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLK1P49759 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLK1P49759 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLK1P49759 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CLK1P49759 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLK1P49759 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.35■□□□□ 0.69
CLK1P49759 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.35■□□□□ 0.69
CLK1P49759 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.35■□□□□ 0.69
CLK1P49759 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.35■□□□□ 0.69
CLK1P49759 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLK1P49759 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLK1P49759 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CLK1P49759 BX005040.4-201ENST00000637145 1518 ntBASIC19.35■□□□□ 0.69
CLK1P49759 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CLK1P49759 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.35■□□□□ 0.69
CLK1P49759 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms