Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.43■□□□□ 0.86
SLC1A6P48664 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SLC1A6P48664 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC1A6P48664 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.43■□□□□ 0.86
SLC1A6P48664 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC1A6P48664 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC1A6P48664 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC1A6P48664 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
SLC1A6P48664 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC1A6P48664 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC1A6P48664 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC1A6P48664 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC1A6P48664 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SLC1A6P48664 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.42■□□□□ 0.86
SLC1A6P48664 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.42■□□□□ 0.86
SLC1A6P48664 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC1A6P48664 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC1A6P48664 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC1A6P48664 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.42■□□□□ 0.86
SLC1A6P48664 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.42■□□□□ 0.86
SLC1A6P48664 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.42■□□□□ 0.86
SLC1A6P48664 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC1A6P48664 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SLC1A6P48664 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SLC1A6P48664 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.41■□□□□ 0.86
SLC1A6P48664 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC1A6P48664 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SLC1A6P48664 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC1A6P48664 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC1A6P48664 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.41■□□□□ 0.86
SLC1A6P48664 AL035685.1-201ENST00000636663 812 ntBASIC20.41■□□□□ 0.86
SLC1A6P48664 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.41■□□□□ 0.86
SLC1A6P48664 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SLC1A6P48664 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SLC1A6P48664 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SLC1A6P48664 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SLC1A6P48664 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC1A6P48664 FP700111.2-201ENST00000619190 1892 ntBASIC20.41■□□□□ 0.86
SLC1A6P48664 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SLC1A6P48664 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.41■□□□□ 0.86
SLC1A6P48664 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC1A6P48664 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC1A6P48664 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.41■□□□□ 0.86
SLC1A6P48664 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
SLC1A6P48664 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SLC1A6P48664 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SLC1A6P48664 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.4■□□□□ 0.86
SLC1A6P48664 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
SLC1A6P48664 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.4■□□□□ 0.86
SLC1A6P48664 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SLC1A6P48664 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.4■□□□□ 0.86
SLC1A6P48664 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC1A6P48664 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.4■□□□□ 0.86
SLC1A6P48664 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.4■□□□□ 0.86
SLC1A6P48664 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SLC1A6P48664 AL512408.1-201ENST00000569378 2000 ntBASIC20.4■□□□□ 0.86
SLC1A6P48664 AC112907.3-201ENST00000577781 2400 ntBASIC20.4■□□□□ 0.86
SLC1A6P48664 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC1A6P48664 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.4■□□□□ 0.86
SLC1A6P48664 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC1A6P48664 AL162377.1-201ENST00000618844 1793 ntBASIC20.4■□□□□ 0.86
SLC1A6P48664 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.4■□□□□ 0.86
SLC1A6P48664 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SLC1A6P48664 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
SLC1A6P48664 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC1A6P48664 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.39■□□□□ 0.86
SLC1A6P48664 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.39■□□□□ 0.86
SLC1A6P48664 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
SLC1A6P48664 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
SLC1A6P48664 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC1A6P48664 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.39■□□□□ 0.85
SLC1A6P48664 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
SLC1A6P48664 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC1A6P48664 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
SLC1A6P48664 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
SLC1A6P48664 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.39■□□□□ 0.85
SLC1A6P48664 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.39■□□□□ 0.85
SLC1A6P48664 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC1A6P48664 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SLC1A6P48664 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SLC1A6P48664 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.38■□□□□ 0.85
SLC1A6P48664 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SLC1A6P48664 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SLC1A6P48664 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC1A6P48664 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.38■□□□□ 0.85
SLC1A6P48664 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
SLC1A6P48664 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC1A6P48664 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SLC1A6P48664 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
SLC1A6P48664 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.38■□□□□ 0.85
SLC1A6P48664 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
SLC1A6P48664 MIR4466-201ENST00000606121 54 ntBASIC20.38■□□□□ 0.85
SLC1A6P48664 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC1A6P48664 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC1A6P48664 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC1A6P48664 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.37■□□□□ 0.85
SLC1A6P48664 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SLC1A6P48664 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SLC1A6P48664 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
SLC1A6P48664 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms