Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
MTHFRP42898 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
MTHFRP42898 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.81■■□□□ 1.08
MTHFRP42898 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
MTHFRP42898 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
MTHFRP42898 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
MTHFRP42898 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
MTHFRP42898 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.8■■□□□ 1.08
MTHFRP42898 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
MTHFRP42898 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MTHFRP42898 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
MTHFRP42898 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.8■■□□□ 1.08
MTHFRP42898 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
MTHFRP42898 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MTHFRP42898 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MTHFRP42898 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
MTHFRP42898 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
MTHFRP42898 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
MTHFRP42898 ECEL1P3-201ENST00000427961 737 ntBASIC21.8■■□□□ 1.08
MTHFRP42898 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
MTHFRP42898 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
MTHFRP42898 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.8■■□□□ 1.08
MTHFRP42898 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC21.8■■□□□ 1.08
MTHFRP42898 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.8■■□□□ 1.08
MTHFRP42898 Z99916.2-201ENST00000604037 246 ntBASIC21.8■■□□□ 1.08
MTHFRP42898 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
MTHFRP42898 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.8■■□□□ 1.08
MTHFRP42898 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
MTHFRP42898 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.8■■□□□ 1.08
MTHFRP42898 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.8■■□□□ 1.08
MTHFRP42898 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
MTHFRP42898 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
MTHFRP42898 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
MTHFRP42898 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.79■■□□□ 1.08
MTHFRP42898 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
MTHFRP42898 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MTHFRP42898 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
MTHFRP42898 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
MTHFRP42898 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MTHFRP42898 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
MTHFRP42898 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.79■■□□□ 1.08
MTHFRP42898 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.79■■□□□ 1.08
MTHFRP42898 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
MTHFRP42898 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.79■■□□□ 1.08
MTHFRP42898 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
MTHFRP42898 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
MTHFRP42898 AC087742.1-201ENST00000575880 1738 ntBASIC21.79■■□□□ 1.08
MTHFRP42898 AC139530.1-201ENST00000575312 1977 ntBASIC21.79■■□□□ 1.08
MTHFRP42898 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC21.79■■□□□ 1.08
MTHFRP42898 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MTHFRP42898 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MTHFRP42898 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
MTHFRP42898 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
MTHFRP42898 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.78■■□□□ 1.08
MTHFRP42898 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC21.78■■□□□ 1.08
MTHFRP42898 KRT18P68-201ENST00000392293 1000 ntBASIC21.78■■□□□ 1.08
MTHFRP42898 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.78■■□□□ 1.08
MTHFRP42898 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
MTHFRP42898 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC21.78■■□□□ 1.08
MTHFRP42898 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
MTHFRP42898 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
MTHFRP42898 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.78■■□□□ 1.08
MTHFRP42898 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
MTHFRP42898 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.78■■□□□ 1.08
MTHFRP42898 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
MTHFRP42898 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.78■■□□□ 1.08
MTHFRP42898 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC21.78■■□□□ 1.08
MTHFRP42898 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MTHFRP42898 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.77■■□□□ 1.08
MTHFRP42898 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.77■■□□□ 1.08
MTHFRP42898 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MTHFRP42898 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
MTHFRP42898 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
MTHFRP42898 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MTHFRP42898 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
MTHFRP42898 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.77■■□□□ 1.08
MTHFRP42898 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.77■■□□□ 1.08
MTHFRP42898 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MTHFRP42898 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MTHFRP42898 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC21.77■■□□□ 1.08
MTHFRP42898 SNORA78-201ENST00000459373 127 ntBASIC21.77■■□□□ 1.08
MTHFRP42898 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.77■■□□□ 1.08
MTHFRP42898 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.77■■□□□ 1.08
MTHFRP42898 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC21.77■■□□□ 1.08
MTHFRP42898 REXO1L12P-201ENST00000622156 912 ntBASIC21.77■■□□□ 1.08
MTHFRP42898 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
MTHFRP42898 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
MTHFRP42898 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.77■■□□□ 1.08
MTHFRP42898 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
MTHFRP42898 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
MTHFRP42898 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MTHFRP42898 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
MTHFRP42898 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MTHFRP42898 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MTHFRP42898 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MTHFRP42898 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MTHFRP42898 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MTHFRP42898 FAM210CP-201ENST00000445714 574 ntBASIC21.76■■□□□ 1.07
MTHFRP42898 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MTHFRP42898 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms