Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SCNN1AP37088 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SCNN1AP37088 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
SCNN1AP37088 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SCNN1AP37088 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
SCNN1AP37088 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SCNN1AP37088 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.7■■□□□ 1.06
SCNN1AP37088 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SCNN1AP37088 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SCNN1AP37088 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SCNN1AP37088 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SCNN1AP37088 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SCNN1AP37088 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
SCNN1AP37088 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
SCNN1AP37088 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.69■■□□□ 1.06
SCNN1AP37088 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SCNN1AP37088 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.69■■□□□ 1.06
SCNN1AP37088 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.69■■□□□ 1.06
SCNN1AP37088 DUX4L16-201ENST00000555130 1264 ntBASIC21.69■■□□□ 1.06
SCNN1AP37088 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.69■■□□□ 1.06
SCNN1AP37088 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.69■■□□□ 1.06
SCNN1AP37088 BID-214ENST00000617586 542 ntTSL 5 BASIC21.69■■□□□ 1.06
SCNN1AP37088 AC092437.1-201ENST00000624794 1048 ntBASIC21.69■■□□□ 1.06
SCNN1AP37088 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.69■■□□□ 1.06
SCNN1AP37088 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
SCNN1AP37088 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.69■■□□□ 1.06
SCNN1AP37088 AC116050.2-201ENST00000612102 1779 ntBASIC21.69■■□□□ 1.06
SCNN1AP37088 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
SCNN1AP37088 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SCNN1AP37088 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SCNN1AP37088 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.68■■□□□ 1.06
SCNN1AP37088 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.68■■□□□ 1.06
SCNN1AP37088 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SCNN1AP37088 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.68■■□□□ 1.06
SCNN1AP37088 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
SCNN1AP37088 AC011767.1-201ENST00000617410 1153 ntBASIC21.68■■□□□ 1.06
SCNN1AP37088 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SCNN1AP37088 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SCNN1AP37088 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.68■■□□□ 1.06
SCNN1AP37088 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.68■■□□□ 1.06
SCNN1AP37088 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SCNN1AP37088 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
SCNN1AP37088 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.68■■□□□ 1.06
SCNN1AP37088 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SCNN1AP37088 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.67■■□□□ 1.06
SCNN1AP37088 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.67■■□□□ 1.06
SCNN1AP37088 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.67■■□□□ 1.06
SCNN1AP37088 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.67■■□□□ 1.06
SCNN1AP37088 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
SCNN1AP37088 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.67■■□□□ 1.06
SCNN1AP37088 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.67■■□□□ 1.06
SCNN1AP37088 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.67■■□□□ 1.06
SCNN1AP37088 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.67■■□□□ 1.06
SCNN1AP37088 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SCNN1AP37088 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.67■■□□□ 1.06
SCNN1AP37088 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SCNN1AP37088 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.67■■□□□ 1.06
SCNN1AP37088 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SCNN1AP37088 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.67■■□□□ 1.06
SCNN1AP37088 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.66■■□□□ 1.06
SCNN1AP37088 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SCNN1AP37088 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
SCNN1AP37088 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SCNN1AP37088 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.66■■□□□ 1.06
SCNN1AP37088 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.66■■□□□ 1.06
SCNN1AP37088 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SCNN1AP37088 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SCNN1AP37088 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SCNN1AP37088 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
SCNN1AP37088 PLK5-205ENST00000642079 1969 ntBASIC21.65■■□□□ 1.06
SCNN1AP37088 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCNN1AP37088 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.65■■□□□ 1.06
SCNN1AP37088 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCNN1AP37088 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.65■■□□□ 1.06
SCNN1AP37088 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCNN1AP37088 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCNN1AP37088 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
SCNN1AP37088 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.65■■□□□ 1.06
SCNN1AP37088 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCNN1AP37088 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SCNN1AP37088 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.65■■□□□ 1.06
SCNN1AP37088 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SCNN1AP37088 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.65■■□□□ 1.06
SCNN1AP37088 AL591742.1-201ENST00000604433 565 ntBASIC21.65■■□□□ 1.06
SCNN1AP37088 AC006128.1-201ENST00000624704 1661 ntBASIC21.65■■□□□ 1.06
SCNN1AP37088 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCNN1AP37088 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.65■■□□□ 1.06
SCNN1AP37088 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.64■■□□□ 1.06
SCNN1AP37088 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
SCNN1AP37088 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
SCNN1AP37088 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SCNN1AP37088 AC007322.3-201ENST00000426526 701 ntBASIC21.64■■□□□ 1.05
SCNN1AP37088 CNN2P6-201ENST00000439038 900 ntBASIC21.64■■□□□ 1.05
SCNN1AP37088 CDV3P1-201ENST00000471403 739 ntBASIC21.64■■□□□ 1.05
SCNN1AP37088 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SCNN1AP37088 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
SCNN1AP37088 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.64■■□□□ 1.05
SCNN1AP37088 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
SCNN1AP37088 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
SCNN1AP37088 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms