Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SOX6P35712 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SOX6P35712 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
SOX6P35712 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SOX6P35712 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SOX6P35712 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
SOX6P35712 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SOX6P35712 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.6■□□□□ 0.57
SOX6P35712 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SOX6P35712 RARRES2P1-201ENST00000474487 481 ntBASIC18.6■□□□□ 0.57
SOX6P35712 AC079089.2-201ENST00000531211 1277 ntBASIC18.6■□□□□ 0.57
SOX6P35712 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SOX6P35712 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SOX6P35712 THA1P-201ENST00000590384 1145 ntBASIC18.6■□□□□ 0.57
SOX6P35712 AC020907.5-201ENST00000624372 1936 ntBASIC18.6■□□□□ 0.57
SOX6P35712 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SOX6P35712 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SOX6P35712 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SOX6P35712 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SOX6P35712 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SOX6P35712 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SOX6P35712 OR7E47P-201ENST00000546390 1422 ntBASIC18.59■□□□□ 0.57
SOX6P35712 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SOX6P35712 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.59■□□□□ 0.57
SOX6P35712 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SOX6P35712 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SOX6P35712 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SOX6P35712 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SOX6P35712 KRT18P24-201ENST00000344739 1156 ntBASIC18.59■□□□□ 0.57
SOX6P35712 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.59■□□□□ 0.57
SOX6P35712 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.59■□□□□ 0.57
SOX6P35712 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.59■□□□□ 0.57
SOX6P35712 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC18.59■□□□□ 0.57
SOX6P35712 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SOX6P35712 AC027702.1-201ENST00000563810 1770 ntBASIC18.59■□□□□ 0.57
SOX6P35712 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.59■□□□□ 0.57
SOX6P35712 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SOX6P35712 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SOX6P35712 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SOX6P35712 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SOX6P35712 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.59■□□□□ 0.57
SOX6P35712 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.59■□□□□ 0.57
SOX6P35712 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SOX6P35712 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.59■□□□□ 0.57
SOX6P35712 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SOX6P35712 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SOX6P35712 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SOX6P35712 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.59■□□□□ 0.57
SOX6P35712 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.59■□□□□ 0.57
SOX6P35712 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.59■□□□□ 0.57
SOX6P35712 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.58■□□□□ 0.57
SOX6P35712 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SOX6P35712 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.58■□□□□ 0.57
SOX6P35712 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SOX6P35712 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SOX6P35712 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SOX6P35712 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SOX6P35712 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.58■□□□□ 0.56
SOX6P35712 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.58■□□□□ 0.56
SOX6P35712 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
SOX6P35712 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.58■□□□□ 0.56
SOX6P35712 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
SOX6P35712 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
SOX6P35712 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SOX6P35712 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.58■□□□□ 0.56
SOX6P35712 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.58■□□□□ 0.56
SOX6P35712 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SOX6P35712 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SOX6P35712 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SOX6P35712 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.57■□□□□ 0.56
SOX6P35712 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SOX6P35712 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
SOX6P35712 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SOX6P35712 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SOX6P35712 AC103724.3-201ENST00000564481 992 ntBASIC18.57■□□□□ 0.56
SOX6P35712 AL031848.2-201ENST00000607670 837 ntBASIC18.57■□□□□ 0.56
SOX6P35712 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
SOX6P35712 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SOX6P35712 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SOX6P35712 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SOX6P35712 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SOX6P35712 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.57■□□□□ 0.56
SOX6P35712 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.57■□□□□ 0.56
SOX6P35712 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SOX6P35712 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SOX6P35712 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SOX6P35712 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.57■□□□□ 0.56
SOX6P35712 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SOX6P35712 PLK5-205ENST00000642079 1969 ntBASIC18.57■□□□□ 0.56
SOX6P35712 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
SOX6P35712 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SOX6P35712 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SOX6P35712 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SOX6P35712 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SOX6P35712 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SOX6P35712 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SOX6P35712 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
SOX6P35712 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SOX6P35712 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
SOX6P35712 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms