Protein–RNA interactions for Protein: P34903

GABRA3, Gamma-aminobutyric acid receptor subunit alpha-3, humanhuman

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA3P34903 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
GABRA3P34903 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.33■□□□□ 0.68
GABRA3P34903 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GABRA3P34903 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
GABRA3P34903 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
GABRA3P34903 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
GABRA3P34903 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
GABRA3P34903 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
GABRA3P34903 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
GABRA3P34903 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GABRA3P34903 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.32■□□□□ 0.68
GABRA3P34903 KRT18P20-201ENST00000548986 1279 ntBASIC19.32■□□□□ 0.68
GABRA3P34903 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.32■□□□□ 0.68
GABRA3P34903 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.32■□□□□ 0.68
GABRA3P34903 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
GABRA3P34903 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
GABRA3P34903 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GABRA3P34903 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GABRA3P34903 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GABRA3P34903 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GABRA3P34903 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
GABRA3P34903 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GABRA3P34903 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GABRA3P34903 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GABRA3P34903 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GABRA3P34903 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GABRA3P34903 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GABRA3P34903 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GABRA3P34903 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.31■□□□□ 0.68
GABRA3P34903 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GABRA3P34903 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GABRA3P34903 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GABRA3P34903 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
GABRA3P34903 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
GABRA3P34903 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
GABRA3P34903 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.3■□□□□ 0.68
GABRA3P34903 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GABRA3P34903 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
GABRA3P34903 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GABRA3P34903 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GABRA3P34903 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GABRA3P34903 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
GABRA3P34903 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
GABRA3P34903 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
GABRA3P34903 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
GABRA3P34903 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
GABRA3P34903 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GABRA3P34903 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
GABRA3P34903 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.3■□□□□ 0.68
GABRA3P34903 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
GABRA3P34903 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.3■□□□□ 0.68
GABRA3P34903 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
GABRA3P34903 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GABRA3P34903 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GABRA3P34903 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GABRA3P34903 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GABRA3P34903 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GABRA3P34903 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GABRA3P34903 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.29■□□□□ 0.68
GABRA3P34903 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
GABRA3P34903 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.29■□□□□ 0.68
GABRA3P34903 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GABRA3P34903 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GABRA3P34903 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GABRA3P34903 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.29■□□□□ 0.68
GABRA3P34903 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GABRA3P34903 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.29■□□□□ 0.68
GABRA3P34903 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GABRA3P34903 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GABRA3P34903 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GABRA3P34903 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GABRA3P34903 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GABRA3P34903 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GABRA3P34903 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GABRA3P34903 KRT18P5-201ENST00000436075 1291 ntBASIC19.28■□□□□ 0.68
GABRA3P34903 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.28■□□□□ 0.68
GABRA3P34903 AC245052.3-201ENST00000450182 901 ntBASIC19.28■□□□□ 0.68
GABRA3P34903 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.28■□□□□ 0.68
GABRA3P34903 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
GABRA3P34903 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
GABRA3P34903 MIR5787-201ENST00000611784 55 ntBASIC19.28■□□□□ 0.68
GABRA3P34903 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GABRA3P34903 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.28■□□□□ 0.68
GABRA3P34903 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GABRA3P34903 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GABRA3P34903 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.28■□□□□ 0.68
GABRA3P34903 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
GABRA3P34903 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GABRA3P34903 AC121338.2-201ENST00000622535 1744 ntBASIC19.28■□□□□ 0.68
GABRA3P34903 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
GABRA3P34903 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
GABRA3P34903 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GABRA3P34903 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
GABRA3P34903 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GABRA3P34903 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.68
GABRA3P34903 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
GABRA3P34903 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
GABRA3P34903 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.27■□□□□ 0.68
GABRA3P34903 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
GABRA3P34903 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms