Protein–RNA interactions for Protein: P25846

MSH1, DNA mismatch repair protein MSH1, mitochondrial, yeastyeast

Predictions only

Length 959 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH1P25846 YNL150WYNL150W 408 nt3.41□□□□□ -1.86
MSH1P25846 RCY1YJL204C 2523 nt3.41□□□□□ -1.86
MSH1P25846 RPN3YER021W 1572 nt3.41□□□□□ -1.86
MSH1P25846 REC8YPR007C 2043 nt3.41□□□□□ -1.86
MSH1P25846 ADY4YLR227C 1482 nt3.41□□□□□ -1.86
MSH1P25846 ATG13YPR185W 2217 nt3.4□□□□□ -1.86
MSH1P25846 AKR1YDR264C 2295 nt3.4□□□□□ -1.86
MSH1P25846 YDL187CYDL187C 330 nt3.4□□□□□ -1.87
MSH1P25846 SWC4YGR002C 1431 nt3.4□□□□□ -1.87
MSH1P25846 ACF4YJR083C 930 nt3.4□□□□□ -1.87
MSH1P25846 ENV10YLR065C 546 nt3.4□□□□□ -1.87
MSH1P25846 UNG1YML021C 1080 nt3.4□□□□□ -1.87
MSH1P25846 RPL23AYBL087C 414 nt3.4□□□□□ -1.87
MSH1P25846 RCN2YOR220W 798 nt3.4□□□□□ -1.87
MSH1P25846 TPK2YPL203W 1143 nt3.4□□□□□ -1.87
MSH1P25846 YBR062CYBR062C 543 nt3.4□□□□□ -1.87
MSH1P25846 YPR172WYPR172W 603 nt3.4□□□□□ -1.87
MSH1P25846 NCS2YNL119W 1482 nt3.4□□□□□ -1.87
MSH1P25846 MDV1YJL112W 2145 nt3.4□□□□□ -1.87
MSH1P25846 LCB4YOR171C 1875 nt3.39□□□□□ -1.87
MSH1P25846 TAF2YCR042C 4224 nt3.39□□□□□ -1.87
MSH1P25846 HFD1YMR110C 1599 nt3.39□□□□□ -1.87
MSH1P25846 SCY1YGL083W 2415 nt3.39□□□□□ -1.87
MSH1P25846 YDL016CYDL016C 303 nt3.39□□□□□ -1.87
MSH1P25846 NCB2YDR397C 441 nt3.39□□□□□ -1.87
MSH1P25846 DYN2YDR424C 279 nt3.39□□□□□ -1.87
MSH1P25846 NSA2YER126C 786 nt3.39□□□□□ -1.87
MSH1P25846 SLX9YGR081C 633 nt3.39□□□□□ -1.87
MSH1P25846 GIC1YHR061C 945 nt3.39□□□□□ -1.87
MSH1P25846 SDL1YIL167W 633 nt3.39□□□□□ -1.87
MSH1P25846 APQ13YJL075C 417 nt3.39□□□□□ -1.87
MSH1P25846 RPC37YKR025W 849 nt3.39□□□□□ -1.87
MSH1P25846 ECM4YKR076W 1113 nt3.39□□□□□ -1.87
MSH1P25846 RPL22AYLR061W 366 nt3.39□□□□□ -1.87
MSH1P25846 YOR364WYOR364W 369 nt3.39□□□□□ -1.87
MSH1P25846 TRS20YBR254C 528 nt3.39□□□□□ -1.87
MSH1P25846 STN1YDR082W 1485 nt3.39□□□□□ -1.87
MSH1P25846 YDR338CYDR338C 2088 nt3.39□□□□□ -1.87
MSH1P25846 MDM1YML104C 3384 nt3.38□□□□□ -1.87
MSH1P25846 YDR115WYDR115W 318 nt3.38□□□□□ -1.87
MSH1P25846 YGR228WYGR228W 345 nt3.38□□□□□ -1.87
MSH1P25846 YAP5YIR018W 738 nt3.38□□□□□ -1.87
MSH1P25846 IMP4YNL075W 873 nt3.38□□□□□ -1.87
MSH1P25846 PCK1YKR097W 1650 nt3.38□□□□□ -1.87
MSH1P25846 SPP382YLR424W 2127 nt3.38□□□□□ -1.87
MSH1P25846 UTP15YMR093W 1542 nt3.38□□□□□ -1.87
MSH1P25846 RSC1YGR056W 2787 nt3.38□□□□□ -1.87
MSH1P25846 SRB4YER022W 2064 nt3.37□□□□□ -1.87
MSH1P25846 MAL33YBR297W 1407 nt3.37□□□□□ -1.87
MSH1P25846 CIN8YEL061C 3003 nt3.37□□□□□ -1.87
MSH1P25846 SHE4YOR035C 2370 nt3.37□□□□□ -1.87
MSH1P25846 snR59snR59 78 nt3.37□□□□□ -1.87
MSH1P25846 MTC3YGL226W 372 nt3.37□□□□□ -1.87
MSH1P25846 LSM8YJR022W 330 nt3.37□□□□□ -1.87
MSH1P25846 SFM1YOR021C 642 nt3.37□□□□□ -1.87
MSH1P25846 GAL7YBR018C 1101 nt3.37□□□□□ -1.87
MSH1P25846 TIM12YBR091C 330 nt3.37□□□□□ -1.87
MSH1P25846 JJJ2YJL162C 1752 nt3.37□□□□□ -1.87
MSH1P25846 GAL80YML051W 1308 nt3.37□□□□□ -1.87
MSH1P25846 DNM1YLL001W 2274 nt3.36□□□□□ -1.87
MSH1P25846 YCR108CYCR108C 192 nt3.36□□□□□ -1.87
MSH1P25846 YDR090CYDR090C 933 nt3.36□□□□□ -1.87
MSH1P25846 MTC7YEL033W 420 nt3.36□□□□□ -1.87
MSH1P25846 SCEIQ0160 708 nt3.36□□□□□ -1.87
MSH1P25846 YIR036W-AYIR036W-A 402 nt3.36□□□□□ -1.87
MSH1P25846 YLR297WYLR297W 390 nt3.36□□□□□ -1.87
MSH1P25846 OST6YML019W 999 nt3.36□□□□□ -1.87
MSH1P25846 YMR141CYMR141C 309 nt3.36□□□□□ -1.87
MSH1P25846 RFC3YNL290W 1023 nt3.36□□□□□ -1.87
MSH1P25846 YOL013W-BYOL013W-B 291 nt3.36□□□□□ -1.87
MSH1P25846 ERG11YHR007C 1593 nt3.36□□□□□ -1.87
MSH1P25846 AFR1YDR085C 1863 nt3.36□□□□□ -1.87
MSH1P25846 RRM3YHR031C 2172 nt3.36□□□□□ -1.87
MSH1P25846 TFC1YBR123C 1950 nt3.36□□□□□ -1.87
MSH1P25846 TMA64YDR117C 1698 nt3.36□□□□□ -1.87
MSH1P25846 ENA2YDR039C 3276 nt3.36□□□□□ -1.87
MSH1P25846 ENA1YDR040C 3276 nt3.36□□□□□ -1.87
MSH1P25846 NMD2YHR077C 3270 nt3.36□□□□□ -1.87
MSH1P25846 IOC3YFR013W 2364 nt3.36□□□□□ -1.87
MSH1P25846 YSP2YDR326C 4317 nt3.35□□□□□ -1.87
MSH1P25846 YGR053CYGR053C 852 nt3.35□□□□□ -1.87
MSH1P25846 YIR040CYIR040C 333 nt3.35□□□□□ -1.87
MSH1P25846 RPS28BYLR264W 204 nt3.35□□□□□ -1.87
MSH1P25846 COX8YLR395C 237 nt3.35□□□□□ -1.87
MSH1P25846 YBL039W-BYBL039W-B 180 nt3.35□□□□□ -1.87
MSH1P25846 SWS2YNL081C 432 nt3.35□□□□□ -1.87
MSH1P25846 YOL019W-AYOL019W-A 153 nt3.35□□□□□ -1.87
MSH1P25846 CDH1YGL003C 1701 nt3.35□□□□□ -1.87
MSH1P25846 GCD6YDR211W 2139 nt3.35□□□□□ -1.87
MSH1P25846 AVT2YEL064C 1443 nt3.35□□□□□ -1.87
MSH1P25846 KAR9YPL269W 1935 nt3.34□□□□□ -1.87
MSH1P25846 EMP70YLR083C 2004 nt3.34□□□□□ -1.87
MSH1P25846 PAU10YDR542W 363 nt3.34□□□□□ -1.87
MSH1P25846 CHZ1YER030W 462 nt3.34□□□□□ -1.87
MSH1P25846 YER091C-AYER091C-A 222 nt3.34□□□□□ -1.87
MSH1P25846 YER175W-AYER175W-A 165 nt3.34□□□□□ -1.87
MSH1P25846 FMP32YFL046W 624 nt3.34□□□□□ -1.87
MSH1P25846 PAU11YGL261C 363 nt3.34□□□□□ -1.87
MSH1P25846 ILM1YJR118C 612 nt3.34□□□□□ -1.87
MSH1P25846 CWC24YLR323C 780 nt3.34□□□□□ -1.87
Retrieved 100 of 7,029 protein–RNA pairs in 25.1 ms