Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MMP11P24347 AC003102.1-202ENST00000563394 1796 ntBASIC19.74■□□□□ 0.75
MMP11P24347 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MMP11P24347 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.73■□□□□ 0.75
MMP11P24347 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.73■□□□□ 0.75
MMP11P24347 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.73■□□□□ 0.75
MMP11P24347 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
MMP11P24347 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.73■□□□□ 0.75
MMP11P24347 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.73■□□□□ 0.75
MMP11P24347 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
MMP11P24347 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MMP11P24347 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.73■□□□□ 0.75
MMP11P24347 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MMP11P24347 KRT16P2-201ENST00000414673 1423 ntBASIC19.73■□□□□ 0.75
MMP11P24347 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
MMP11P24347 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.73■□□□□ 0.75
MMP11P24347 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MMP11P24347 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
MMP11P24347 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MMP11P24347 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
MMP11P24347 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MMP11P24347 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
MMP11P24347 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
MMP11P24347 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MMP11P24347 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MMP11P24347 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
MMP11P24347 SLC29A4P1-201ENST00000398760 971 ntBASIC19.72■□□□□ 0.75
MMP11P24347 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
MMP11P24347 GUSBP6-202ENST00000438529 1198 ntBASIC19.72■□□□□ 0.75
MMP11P24347 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.72■□□□□ 0.75
MMP11P24347 AF201337.1-201ENST00000520239 748 ntBASIC19.72■□□□□ 0.75
MMP11P24347 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.72■□□□□ 0.75
MMP11P24347 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MMP11P24347 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
MMP11P24347 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MMP11P24347 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
MMP11P24347 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
MMP11P24347 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MMP11P24347 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MMP11P24347 Z98882.1-201ENST00000622160 2253 ntBASIC19.71■□□□□ 0.75
MMP11P24347 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.71■□□□□ 0.75
MMP11P24347 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MMP11P24347 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.71■□□□□ 0.75
MMP11P24347 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.71■□□□□ 0.75
MMP11P24347 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.71■□□□□ 0.75
MMP11P24347 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
MMP11P24347 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.71■□□□□ 0.75
MMP11P24347 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MMP11P24347 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.71■□□□□ 0.75
MMP11P24347 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
MMP11P24347 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MMP11P24347 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MMP11P24347 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.71■□□□□ 0.75
MMP11P24347 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
MMP11P24347 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
MMP11P24347 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MMP11P24347 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MMP11P24347 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MMP11P24347 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MMP11P24347 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MMP11P24347 AC068338.2-201ENST00000563278 1430 ntBASIC19.7■□□□□ 0.74
MMP11P24347 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
MMP11P24347 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
MMP11P24347 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MMP11P24347 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MMP11P24347 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.7■□□□□ 0.74
MMP11P24347 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.7■□□□□ 0.74
MMP11P24347 AC105036.2-201ENST00000569468 176 ntBASIC19.7■□□□□ 0.74
MMP11P24347 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.7■□□□□ 0.74
MMP11P24347 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MMP11P24347 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MMP11P24347 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.7■□□□□ 0.74
MMP11P24347 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
MMP11P24347 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.7■□□□□ 0.74
MMP11P24347 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.7■□□□□ 0.74
MMP11P24347 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
MMP11P24347 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.69■□□□□ 0.74
MMP11P24347 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.69■□□□□ 0.74
MMP11P24347 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
MMP11P24347 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MMP11P24347 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
MMP11P24347 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.69■□□□□ 0.74
MMP11P24347 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.69■□□□□ 0.74
MMP11P24347 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
MMP11P24347 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.69■□□□□ 0.74
MMP11P24347 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.69■□□□□ 0.74
MMP11P24347 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
MMP11P24347 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
MMP11P24347 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
MMP11P24347 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MMP11P24347 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
MMP11P24347 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
MMP11P24347 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MMP11P24347 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.68■□□□□ 0.74
MMP11P24347 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.68■□□□□ 0.74
MMP11P24347 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
MMP11P24347 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.68■□□□□ 0.74
MMP11P24347 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MMP11P24347 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MMP11P24347 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms