Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCL1P22362 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.93■□□□□ 0.46
CCL1P22362 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.92■□□□□ 0.46
CCL1P22362 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.92■□□□□ 0.46
CCL1P22362 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCL1P22362 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCL1P22362 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCL1P22362 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCL1P22362 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCL1P22362 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCL1P22362 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCL1P22362 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.92■□□□□ 0.46
CCL1P22362 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.92■□□□□ 0.46
CCL1P22362 AC142381.2-201ENST00000566120 298 ntBASIC17.92■□□□□ 0.46
CCL1P22362 AC138907.5-202ENST00000569484 235 ntBASIC17.92■□□□□ 0.46
CCL1P22362 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.92■□□□□ 0.46
CCL1P22362 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.92■□□□□ 0.46
CCL1P22362 MIR6084-201ENST00000622012 110 ntBASIC17.92■□□□□ 0.46
CCL1P22362 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.92■□□□□ 0.46
CCL1P22362 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
CCL1P22362 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCL1P22362 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCL1P22362 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.92■□□□□ 0.46
CCL1P22362 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCL1P22362 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCL1P22362 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CCL1P22362 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CCL1P22362 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCL1P22362 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CCL1P22362 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.91■□□□□ 0.46
CCL1P22362 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.91■□□□□ 0.46
CCL1P22362 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCL1P22362 AC027612.3-201ENST00000413684 1047 ntBASIC17.91■□□□□ 0.46
CCL1P22362 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.91■□□□□ 0.46
CCL1P22362 AC020907.5-201ENST00000624372 1936 ntBASIC17.91■□□□□ 0.46
CCL1P22362 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CCL1P22362 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCL1P22362 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCL1P22362 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.91■□□□□ 0.46
CCL1P22362 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CCL1P22362 KRT16P2-201ENST00000414673 1423 ntBASIC17.9■□□□□ 0.46
CCL1P22362 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.46
CCL1P22362 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CCL1P22362 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCL1P22362 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCL1P22362 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCL1P22362 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CCL1P22362 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCL1P22362 RALB-208ENST00000631312 311 ntTSL 5 BASIC17.9■□□□□ 0.46
CCL1P22362 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CCL1P22362 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CCL1P22362 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCL1P22362 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCL1P22362 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCL1P22362 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCL1P22362 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCL1P22362 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC17.89■□□□□ 0.46
CCL1P22362 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
CCL1P22362 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.89■□□□□ 0.45
CCL1P22362 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCL1P22362 IRS3P-201ENST00000223076 1006 ntBASIC17.89■□□□□ 0.45
CCL1P22362 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCL1P22362 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCL1P22362 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCL1P22362 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.89■□□□□ 0.45
CCL1P22362 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.89■□□□□ 0.45
CCL1P22362 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.89■□□□□ 0.45
CCL1P22362 RARRES2P11-201ENST00000635158 484 ntBASIC17.89■□□□□ 0.45
CCL1P22362 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCL1P22362 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCL1P22362 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CCL1P22362 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CCL1P22362 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCL1P22362 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCL1P22362 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCL1P22362 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.88■□□□□ 0.45
CCL1P22362 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.88■□□□□ 0.45
CCL1P22362 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCL1P22362 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.88■□□□□ 0.45
CCL1P22362 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.88■□□□□ 0.45
CCL1P22362 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.88■□□□□ 0.45
CCL1P22362 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCL1P22362 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.88■□□□□ 0.45
CCL1P22362 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCL1P22362 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCL1P22362 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
CCL1P22362 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCL1P22362 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CCL1P22362 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCL1P22362 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCL1P22362 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CCL1P22362 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.88■□□□□ 0.45
CCL1P22362 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCL1P22362 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.87■□□□□ 0.45
CCL1P22362 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.87■□□□□ 0.45
CCL1P22362 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCL1P22362 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCL1P22362 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCL1P22362 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCL1P22362 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms