Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
KRT4P19013 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.83■□□□□ 0.93
KRT4P19013 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
KRT4P19013 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.83■□□□□ 0.93
KRT4P19013 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
KRT4P19013 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.83■□□□□ 0.92
KRT4P19013 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.83■□□□□ 0.92
KRT4P19013 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.83■□□□□ 0.92
KRT4P19013 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
KRT4P19013 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.83■□□□□ 0.92
KRT4P19013 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.83■□□□□ 0.92
KRT4P19013 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
KRT4P19013 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
KRT4P19013 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
KRT4P19013 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
KRT4P19013 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.83■□□□□ 0.92
KRT4P19013 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.82■□□□□ 0.92
KRT4P19013 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.82■□□□□ 0.92
KRT4P19013 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
KRT4P19013 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KRT4P19013 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.82■□□□□ 0.92
KRT4P19013 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
KRT4P19013 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
KRT4P19013 DUX4L19-201ENST00000557448 1267 ntBASIC20.82■□□□□ 0.92
KRT4P19013 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.82■□□□□ 0.92
KRT4P19013 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.82■□□□□ 0.92
KRT4P19013 SMUG1P1-201ENST00000590640 811 ntBASIC20.82■□□□□ 0.92
KRT4P19013 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.82■□□□□ 0.92
KRT4P19013 AC011298.3-201ENST00000615796 283 ntBASIC20.82■□□□□ 0.92
KRT4P19013 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KRT4P19013 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
KRT4P19013 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.82■□□□□ 0.92
KRT4P19013 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.82■□□□□ 0.92
KRT4P19013 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
KRT4P19013 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
KRT4P19013 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
KRT4P19013 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
KRT4P19013 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
KRT4P19013 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
KRT4P19013 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
KRT4P19013 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
KRT4P19013 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.81■□□□□ 0.92
KRT4P19013 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.81■□□□□ 0.92
KRT4P19013 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
KRT4P19013 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.81■□□□□ 0.92
KRT4P19013 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.81■□□□□ 0.92
KRT4P19013 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KRT4P19013 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.81■□□□□ 0.92
KRT4P19013 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KRT4P19013 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KRT4P19013 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
KRT4P19013 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KRT4P19013 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KRT4P19013 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
KRT4P19013 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KRT4P19013 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
KRT4P19013 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KRT4P19013 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KRT4P19013 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
KRT4P19013 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
KRT4P19013 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KRT4P19013 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
KRT4P19013 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
KRT4P19013 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
KRT4P19013 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
KRT4P19013 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.8■□□□□ 0.92
KRT4P19013 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.8■□□□□ 0.92
KRT4P19013 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.8■□□□□ 0.92
KRT4P19013 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
KRT4P19013 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
KRT4P19013 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KRT4P19013 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
KRT4P19013 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.8■□□□□ 0.92
KRT4P19013 AL512408.1-201ENST00000569378 2000 ntBASIC20.8■□□□□ 0.92
KRT4P19013 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.79■□□□□ 0.92
KRT4P19013 FP700111.2-201ENST00000619190 1892 ntBASIC20.79■□□□□ 0.92
KRT4P19013 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
KRT4P19013 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
KRT4P19013 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
KRT4P19013 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
KRT4P19013 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.79■□□□□ 0.92
KRT4P19013 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
KRT4P19013 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
KRT4P19013 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.79■□□□□ 0.92
KRT4P19013 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
KRT4P19013 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.79■□□□□ 0.92
KRT4P19013 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.79■□□□□ 0.92
KRT4P19013 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.79■□□□□ 0.92
KRT4P19013 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
KRT4P19013 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.79■□□□□ 0.92
KRT4P19013 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
KRT4P19013 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
KRT4P19013 AL162377.1-201ENST00000618844 1793 ntBASIC20.79■□□□□ 0.92
KRT4P19013 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
KRT4P19013 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
KRT4P19013 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.78■□□□□ 0.92
KRT4P19013 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.78■□□□□ 0.92
KRT4P19013 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
KRT4P19013 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.78■□□□□ 0.92
KRT4P19013 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms