Protein–RNA interactions for Protein: P0C2J3

TY2B-LR1, Transposon Ty2-LR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,770 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2B-LR1P0C2J3 YGR161W-BYGR161W-B 5313 nt1.76□□□□□ -2.13
TY2B-LR1P0C2J3 YCL019WYCL019W 5313 nt1.76□□□□□ -2.13
TY2B-LR1P0C2J3 NPR1YNL183C 2373 nt1.76□□□□□ -2.13
TY2B-LR1P0C2J3 SPH1YLR313C 1593 nt1.76□□□□□ -2.13
TY2B-LR1P0C2J3 YEL1YBL060W 2064 nt1.76□□□□□ -2.13
TY2B-LR1P0C2J3 RPN5YDL147W 1338 nt1.76□□□□□ -2.13
TY2B-LR1P0C2J3 CDC25YLR310C 4770 nt1.75□□□□□ -2.13
TY2B-LR1P0C2J3 RRP42YDL111C 798 nt1.75□□□□□ -2.13
TY2B-LR1P0C2J3 YGL069CYGL069C 465 nt1.75□□□□□ -2.13
TY2B-LR1P0C2J3 MRE11YMR224C 2079 nt1.75□□□□□ -2.13
TY2B-LR1P0C2J3 RRP8YDR083W 1179 nt1.75□□□□□ -2.13
TY2B-LR1P0C2J3 tT(UGU)HtT(UGU)H 72 nt1.75□□□□□ -2.13
TY2B-LR1P0C2J3 HCH1YNL281W 462 nt1.75□□□□□ -2.13
TY2B-LR1P0C2J3 MCT1YOR221C 1083 nt1.75□□□□□ -2.13
TY2B-LR1P0C2J3 SPE1YKL184W 1401 nt1.74□□□□□ -2.13
TY2B-LR1P0C2J3 HFM1YGL251C 3564 nt1.74□□□□□ -2.13
TY2B-LR1P0C2J3 FRQ1YDR373W 573 nt1.74□□□□□ -2.13
TY2B-LR1P0C2J3 ENP2YGR145W 2124 nt1.74□□□□□ -2.13
TY2B-LR1P0C2J3 ISW2YOR304W 3363 nt1.73□□□□□ -2.13
TY2B-LR1P0C2J3 RAV2YDR202C 1056 nt1.73□□□□□ -2.13
TY2B-LR1P0C2J3 TIM9YEL020W-A 264 nt1.73□□□□□ -2.13
TY2B-LR1P0C2J3 YGL117WYGL117W 798 nt1.73□□□□□ -2.13
TY2B-LR1P0C2J3 VMA10YHR039C-A 345 nt1.73□□□□□ -2.13
TY2B-LR1P0C2J3 YHR097CYHR097C 1101 nt1.72□□□□□ -2.13
TY2B-LR1P0C2J3 TRM112YNR046W 408 nt1.72□□□□□ -2.13
TY2B-LR1P0C2J3 SLM4YBR077C 489 nt1.72□□□□□ -2.13
TY2B-LR1P0C2J3 YMR1YJR110W 2067 nt1.71□□□□□ -2.14
TY2B-LR1P0C2J3 PET309YLR067C 2898 nt1.71□□□□□ -2.14
TY2B-LR1P0C2J3 YER067C-AYER067C-A 324 nt1.71□□□□□ -2.14
TY2B-LR1P0C2J3 MIG2YGL209W 1149 nt1.71□□□□□ -2.14
TY2B-LR1P0C2J3 HKR1YDR420W 5409 nt1.71□□□□□ -2.14
TY2B-LR1P0C2J3 DFG16YOR030W 1860 nt1.7□□□□□ -2.14
TY2B-LR1P0C2J3 TCM62YBR044C 1719 nt1.7□□□□□ -2.14
TY2B-LR1P0C2J3 RNA1YMR235C 1224 nt1.7□□□□□ -2.14
TY2B-LR1P0C2J3 FMP16YDR070C 282 nt1.7□□□□□ -2.14
TY2B-LR1P0C2J3 RTT105YER104W 627 nt1.7□□□□□ -2.14
TY2B-LR1P0C2J3 BUR6YER159C 429 nt1.7□□□□□ -2.14
TY2B-LR1P0C2J3 YGR242WYGR242W 309 nt1.7□□□□□ -2.14
TY2B-LR1P0C2J3 NDC80YIL144W 2076 nt1.69□□□□□ -2.14
TY2B-LR1P0C2J3 STP1YDR463W 1560 nt1.69□□□□□ -2.14
TY2B-LR1P0C2J3 MET18YIL128W 3099 nt1.69□□□□□ -2.14
TY2B-LR1P0C2J3 YDR461C-AYDR461C-A 243 nt1.69□□□□□ -2.14
TY2B-LR1P0C2J3 RPS0BYLR048W 759 nt1.69□□□□□ -2.14
TY2B-LR1P0C2J3 SVS1YPL163C 783 nt1.69□□□□□ -2.14
TY2B-LR1P0C2J3 YJL070CYJL070C 2667 nt1.69□□□□□ -2.14
TY2B-LR1P0C2J3 NOP56YLR197W 1515 nt1.69□□□□□ -2.14
TY2B-LR1P0C2J3 IST2YBR086C 2841 nt1.69□□□□□ -2.14
TY2B-LR1P0C2J3 SEC15YGL233W 2733 nt1.68□□□□□ -2.14
TY2B-LR1P0C2J3 CBP6YBR120C 489 nt1.68□□□□□ -2.14
TY2B-LR1P0C2J3 UTP6YDR449C 1323 nt1.68□□□□□ -2.14
TY2B-LR1P0C2J3 URB2YJR041C 3525 nt1.68□□□□□ -2.14
TY2B-LR1P0C2J3 SPS2YDR522C 1509 nt1.68□□□□□ -2.14
TY2B-LR1P0C2J3 PUF2YPR042C 3228 nt1.68□□□□□ -2.14
TY2B-LR1P0C2J3 ARP10YDR106W 855 nt1.67□□□□□ -2.14
TY2B-LR1P0C2J3 YDR115WYDR115W 318 nt1.67□□□□□ -2.14
TY2B-LR1P0C2J3 PAM16YJL104W 450 nt1.67□□□□□ -2.14
TY2B-LR1P0C2J3 PRP16YKR086W 3216 nt1.67□□□□□ -2.14
TY2B-LR1P0C2J3 RKM1YPL208W 1752 nt1.67□□□□□ -2.14
TY2B-LR1P0C2J3 HTD2YHR067W 843 nt1.67□□□□□ -2.14
TY2B-LR1P0C2J3 MSL1YIR009W 336 nt1.67□□□□□ -2.14
TY2B-LR1P0C2J3 YNL203CYNL203C 612 nt1.67□□□□□ -2.14
TY2B-LR1P0C2J3 SRO9YCL037C 1305 nt1.67□□□□□ -2.14
TY2B-LR1P0C2J3 UBP16YPL072W 1500 nt1.66□□□□□ -2.14
TY2B-LR1P0C2J3 YSP1YHR155W 3687 nt1.66□□□□□ -2.14
TY2B-LR1P0C2J3 CIK1YMR198W 1785 nt1.66□□□□□ -2.14
TY2B-LR1P0C2J3 YGR237CYGR237C 2358 nt1.66□□□□□ -2.14
TY2B-LR1P0C2J3 ARG2YJL071W 1725 nt1.66□□□□□ -2.14
TY2B-LR1P0C2J3 ALE1YOR175C 1860 nt1.66□□□□□ -2.14
TY2B-LR1P0C2J3 YBR089WYBR089W 600 nt1.65□□□□□ -2.14
TY2B-LR1P0C2J3 RLF2YPR018W 1821 nt1.65□□□□□ -2.15
TY2B-LR1P0C2J3 GAS2YLR343W 1668 nt1.65□□□□□ -2.15
TY2B-LR1P0C2J3 YMR175W-AYMR175W-A 195 nt1.64□□□□□ -2.15
TY2B-LR1P0C2J3 YPR078CYPR078C 1119 nt1.64□□□□□ -2.15
TY2B-LR1P0C2J3 TAZ1YPR140W 1146 nt1.64□□□□□ -2.15
TY2B-LR1P0C2J3 ULP2YIL031W 3105 nt1.64□□□□□ -2.15
TY2B-LR1P0C2J3 ATP25YMR098C 1839 nt1.64□□□□□ -2.15
TY2B-LR1P0C2J3 SPP382YLR424W 2127 nt1.64□□□□□ -2.15
TY2B-LR1P0C2J3 MAD1YGL086W 2250 nt1.63□□□□□ -2.15
TY2B-LR1P0C2J3 VHR1YIL056W 1923 nt1.63□□□□□ -2.15
TY2B-LR1P0C2J3 GPI17YDR434W 1605 nt1.63□□□□□ -2.15
TY2B-LR1P0C2J3 SCC2YDR180W 4482 nt1.63□□□□□ -2.15
TY2B-LR1P0C2J3 YNL046WYNL046W 519 nt1.62□□□□□ -2.15
TY2B-LR1P0C2J3 ATX2YOR079C 942 nt1.62□□□□□ -2.15
TY2B-LR1P0C2J3 PHO5YBR093C 1404 nt1.62□□□□□ -2.15
TY2B-LR1P0C2J3 PRP18YGR006W 756 nt1.62□□□□□ -2.15
TY2B-LR1P0C2J3 HAL1YPR005C 885 nt1.62□□□□□ -2.15
TY2B-LR1P0C2J3 RIX1YHR197W 2292 nt1.61□□□□□ -2.15
TY2B-LR1P0C2J3 MYO2YOR326W 4725 nt1.61□□□□□ -2.15
TY2B-LR1P0C2J3 IRC6YFR043C 714 nt1.61□□□□□ -2.15
TY2B-LR1P0C2J3 YHR182C-AYHR182C-A 474 nt1.61□□□□□ -2.15
TY2B-LR1P0C2J3 YLR366WYLR366W 306 nt1.61□□□□□ -2.15
TY2B-LR1P0C2J3 YMR321CYMR321C 318 nt1.61□□□□□ -2.15
TY2B-LR1P0C2J3 YOR072W-AYOR072W-A 249 nt1.61□□□□□ -2.15
TY2B-LR1P0C2J3 PTC5YOR090C 1719 nt1.61□□□□□ -2.15
TY2B-LR1P0C2J3 RLP24YLR009W 600 nt1.6□□□□□ -2.15
TY2B-LR1P0C2J3 FMC1YIL098C 468 nt1.59□□□□□ -2.15
TY2B-LR1P0C2J3 YJL119CYJL119C 324 nt1.59□□□□□ -2.15
TY2B-LR1P0C2J3 YPL071CYPL071C 471 nt1.59□□□□□ -2.15
TY2B-LR1P0C2J3 VMR1YHL035C 4779 nt1.59□□□□□ -2.15
TY2B-LR1P0C2J3 UTP25YIL091C 2166 nt1.59□□□□□ -2.16
Retrieved 100 of 7,029 protein–RNA pairs in 17.5 ms